RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TAGAPQ8N103 731 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 ZNF615Q8N8J6 731 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 GBP7Q8N8V2 638 aaPredicted RBP9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 GOLM1Q8NBJ4 401 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 OR52R1Q8NGF1 315 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 OR5M9Q8NGP3 310 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 KAT2AQ92830 837 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 EXOSC8Q96B26 276 aaKnown RBP9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 SPACA9Q96E40 222 aaPredicted RBP9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 CNRIP1Q96F85 164 aaPredicted RBP9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 SGCZQ96LD1 299 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 LDAHQ9H6V9 325 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 EXO5Q9H790 373 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 OXSMQ9NWU1 459 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 ALKBH4Q9NXW9 302 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 MAT2BQ9NZL9 334 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 SLC17A7Q9P2U7 560 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 MCM8Q9UJA3 840 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 DTX4Q9Y2E6 619 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 STK38LQ9Y2H1 464 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 MEMO1Q9Y316 297 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 POLR3HQ9Y535 204 aaPredicted RBP9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 NPFFR2Q9Y5X5 522 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 PTGDR2Q9Y5Y4 395 aa9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.38□□□□□ -0.91
NCKIPSD-202ENST00000413374 CPAMD8Q8IZJ3 1885 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 CCDC151A5D8V7 595 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 GOLGA6L10A6NI86 522 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 GLSO94925 669 aaPredicted RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 FBXO45P0C2W1 286 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 CREB1P16220 341 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PCSK2P16519 638 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 TIA1P31483 386 aaKnown RBP eCLIP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 SOX18P35713 384 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 TRA2BP62995 288 aaKnown RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 SLC18A2Q05940 514 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 FOXO1Q12778 655 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 MAP4K2Q12851 820 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 DUSP8Q13202 625 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 SLC10A1Q14973 349 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PRSS53Q2L4Q9 553 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 ERCC6LQ2NKX8 1250 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 GXYLT1Q4G148 440 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 LIPMQ5VYY2 423 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 ZNF585AQ6P3V2 769 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 MTFR2Q6P444 385 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PAOXQ6QHF9 649 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 GK5Q6ZS86 529 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 FRMD7Q6ZUT3 714 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 SLC22A16Q86VW1 577 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 SRRM1Q8IYB3 904 aaKnown RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 LRRC25Q8N386 305 aaPredicted RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 VWA5B2Q8N398 1253 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 RPRMLQ8N4K4 120 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 SLC15A4Q8N697 577 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 ZNF441Q8N8Z8 693 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 FAM57AQ8TBR7 257 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PAQR8Q8TEZ7 354 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 DIO2Q92813 273 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 ADIPOR1Q96A54 375 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 ZNF681Q96N22 645 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 FAM111AQ96PZ2 611 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 MECRQ9BV79 373 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 GATA5Q9BWX5 397 aaPredicted RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 ITPAQ9BY32 194 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 IQCGQ9H095 443 aaKnown RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 NXF5Q9H1B4 397 aaKnown RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PPCSQ9HAB8 311 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 IL1RL2Q9HB29 575 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PROK2Q9HC23 129 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 EHD3Q9NZN3 535 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PLLPQ9Y342 182 aa9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 PRRC2CQ9Y520 2896 aaKnown RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 RP1L1Q8IWN7 2480 aaPredicted RBP9.37□□□□□ -0.91
NCKIPSD-202ENST00000413374 ADAM10O14672 748 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 SEC22BO75396 215 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 CBX7O95931 251 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 GPX3P22352 226 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 HTR1EP28566 365 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 ALDH3A1P30838 453 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 TRPC1P48995 793 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 SMSP52788 366 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 NRG3P56975 720 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 HEPACAMQ14CZ8 416 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 PCLAFQ15004 111 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 SPIN4Q56A73 249 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 ARHGAP11AQ6P4F7 1023 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 BNC2Q6ZN30 1099 aaPredicted RBP9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 TICAM1Q8IUC6 712 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 FAM109AQ8N4B1 249 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 ZNF808Q8N4W9 903 aaPredicted RBP9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 BANPQ8N9N5 519 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 OR7G1Q8NGA0 311 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 OR9A2Q8NGT5 310 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 RDH11Q8TC12 318 aa9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 AENQ8WTP8 325 aaKnown RBP9.36□□□□□ -0.91
NCKIPSD-202ENST00000413374 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms