RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 OR5K1Q8NHB7 308 aa8.09□□□□□ -1.11
SYNE1-211ENST00000413186 KLHL6Q8WZ60 621 aa8.09□□□□□ -1.11
SYNE1-211ENST00000413186 NR4A3Q92570 626 aa8.09□□□□□ -1.11
SYNE1-211ENST00000413186 G6PC3Q9BUM1 346 aa8.09□□□□□ -1.11
SYNE1-211ENST00000413186 CHID1Q9BWS9 393 aa8.09□□□□□ -1.11
SYNE1-211ENST00000413186 RBCK1Q9BYM8 510 aa8.09□□□□□ -1.11
SYNE1-211ENST00000413186 FARSBQ9NSD9 589 aaKnown RBP8.09□□□□□ -1.11
SYNE1-211ENST00000413186 WDR45Q9Y484 360 aa8.09□□□□□ -1.11
SYNE1-211ENST00000413186 TANC1Q9C0D5 1861 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CENPXA8MT69 81 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 OR7A17O14581 309 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 TP53I11O14683 189 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 TAPBPO15533 448 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 KLK8O60259 260 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 GPR37L1O60883 481 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 SCN2BO60939 215 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 BCAS1O75363 584 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 PSMB9P28065 219 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 TAS2R38P59533 333 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CSNK1G2P78368 415 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 POU6F2P78424 691 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 SIM1P81133 766 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 EIF2B1Q14232 305 aaKnown RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 FAM189A2Q15884 450 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ERMP1Q7Z2K6 904 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 KMT5CQ86Y97 462 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 RAB43Q86YS6 212 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CBR4Q8N4T8 237 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 NUP43Q8NFH3 380 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 LRTOMTQ8WZ04 291 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 EID2BQ96D98 161 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 SLC38A2Q96QD8 506 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 YIPF4Q9BSR8 244 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 SGPP1Q9BX95 441 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 HMG20AQ9NP66 347 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 FGF21Q9NSA1 209 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CUTCQ9NTM9 273 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CLN6Q9NWW5 311 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 A0A0A6YYC8 382 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 I3L1I5 382 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 PPP6CO00743 305 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 SDC1P18827 310 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CARTPTQ16568 116 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 HLA-BQ31612 363 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CCSMST1Q4G0I0 132 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 BICRALQ6AI39 1079 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CGB2Q6NT52 195 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 WDR5BQ86VZ2 330 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 FOXRED2Q8IWF2 684 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 BBS10Q8TAM1 723 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 BMFQ96LC9 184 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 MAP3K3Q99759 626 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 KCNS3Q9BQ31 491 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ADI1Q9BV57 179 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 HDHD2Q9H0R4 259 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 KLHL1Q9NR64 748 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF224Q9NZL3 707 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CCDC59Q9P031 241 aaKnown RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 BTNL2Q9UIR0 455 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF451Q9Y4E5 1061 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 MYO15AQ9UKN7 3530 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ARHGAP33O14559 1287 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 SERPINA1P01009 418 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 PAICSP22234 425 aaKnown RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CERS1P27544 350 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 EMP2P54851 167 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 EEF1A2Q05639 463 aaKnown RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 FZD2Q14332 565 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 DCST1Q5T197 706 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 DCAF12Q5T6F0 453 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 BPHLQ86WA6 291 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 GEMIN6Q8WXD5 167 aaKnown RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 LRRC61Q9BV99 259 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 MS4A8Q9BY19 250 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 KCNK13Q9HB14 408 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 NLGN3Q9NZ94 848 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ADAM30Q9UKF2 790 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 A0A1W2PQ72 361 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 H0Y8G0 127 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 ARPC2O15144 300 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 RDH16O75452 317 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 CDC123O75794 336 aaPredicted RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 H6PDO95479 791 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 BCHEP06276 602 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 TFPIP10646 304 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 MYL12AP19105 171 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 HTR1EP28566 365 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 DNAJA1P31689 397 aaKnown RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 RORAP35398 523 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 AQP4P55087 323 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 COX10Q12887 443 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 FGL2Q14314 439 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 GPR68Q15743 365 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 NEDD8Q15843 81 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 SYT16Q17RD7 645 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.08□□□□□ -1.12
SYNE1-211ENST00000413186 C6orf132Q5T0Z8 1188 aa8.08□□□□□ -1.12
SYNE1-211ENST00000413186 NANOGP8Q6NSW7 305 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms