RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SRYQ05066 204 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 TAF13Q15543 124 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 TPSAB1Q15661 275 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 SYPL1Q16563 259 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 FGD3Q5JSP0 725 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 CTSL3PQ5NE16 218 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 DCAF10Q5QP82 559 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 C10orf120Q5SQS8 335 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 C8orf82Q6P1X6 216 aaPredicted RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 ZNF841Q6ZN19 808 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 ANO5Q75V66 913 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 PARGQ86W56 976 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 WDR49Q8IV35 697 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 OFCC1Q8IZS5 231 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 COMMD1Q8N668 190 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 ARFGAP1Q8N6T3 406 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 CCDC185Q8N715 623 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 BPIFCQ8NFQ6 507 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 OR2T12Q8NG77 320 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 OR13C3Q8NGS6 347 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 GPR148Q8TDV2 347 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 SMPDL3AQ92484 453 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 RPL3LQ92901 407 aaKnown RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 ISG20Q96AZ6 181 aaKnown RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 SCMH1Q96GD3 660 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 NSL1Q96IY1 281 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 C12orf66Q96MD2 445 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 C17orf77Q96MU5 243 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 DCTN5Q9BTE1 182 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 SEMA4CQ9C0C4 833 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 IQCGQ9H095 443 aaKnown RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 VCPKMTQ9H867 229 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 RAB18Q9NP72 206 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 GDF3Q9NR23 364 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 SMOXQ9NWM0 555 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 POLKQ9UBT6 870 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 RPH3ALQ9UNE2 315 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 PTGDR2Q9Y5Y4 395 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 CCDC7Q96M83 1385 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 A0A1W2PPI3 338 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 OR6C75A6NL08 312 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 SNTNA6NMZ2 147 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 INAFM1C9JVW0 142 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 GOLGA8SH3BPF8 625 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 BTN3A3O00478 584 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 FPGTO14772 594 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 ARHGEF9O43307 516 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 RNF13O43567 381 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 TPST2O60704 377 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 KCNJ13O60928 360 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 CDH16O75309 829 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 MTRF1O75570 445 aaKnown RBP4.37□□□□□ -1.71
LSM5-205ENST00000409952 FLOT1O75955 427 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 KRT33AO76009 404 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 BAG4O95429 457 aaKnown RBP4.37□□□□□ -1.71
LSM5-205ENST00000409952 SYF2O95926 243 aaKnown RBP4.37□□□□□ -1.71
LSM5-205ENST00000409952 KRT6AP02538 564 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 GSTT2P0CG29 244 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 GSTT2BP0CG30 244 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 HLA-DOBP13765 273 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 CA6P23280 308 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 EPHA2P29317 976 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
LSM5-205ENST00000409952 HTR5AP47898 357 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 AP3M2P53677 418 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 GAS1P54826 345 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 OR1D5P58170 312 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 ABATP80404 500 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
LSM5-205ENST00000409952 MESDQ14696 234 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 KIR2DS3Q14952 304 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 MAPK6Q16659 721 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 TMEM44Q2T9K0 475 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 ZNF699Q32M78 642 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 C1orf189Q5VU69 101 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 NLRP9Q7RTR0 991 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 CACUL1Q86Y37 369 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 TMEM123Q8N131 208 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 GPC2Q8N158 579 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 DNAJC22Q8N4W6 341 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 MNS1Q8NEH6 495 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 KCNG3Q8TAE7 436 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 ASB5Q8WWX0 329 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 SMG7Q92540 1137 aaKnown RBP4.37□□□□□ -1.71
LSM5-205ENST00000409952 C19orf60Q96EN9 201 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 PCED1BQ96HM7 432 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 ANKRD27Q96NW4 1050 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 RPRD1AQ96P16 312 aaPredicted RBP4.37□□□□□ -1.71
LSM5-205ENST00000409952 TGM7Q96PF1 710 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 UHRF2Q96PU4 802 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 NEDD4LQ96PU5 975 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 SIKE1Q9BRV8 207 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 PRSS22Q9GZN4 317 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 SHARPINQ9H0F6 387 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 CSTL1Q9H114 145 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 CPVLQ9H3G5 476 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 HAUS4Q9H6D7 363 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 EGLN3Q9H6Z9 239 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 STARD5Q9NSY2 213 aa4.37□□□□□ -1.71
LSM5-205ENST00000409952 C1orf123Q9NWV4 160 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms