RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 PORP16435 677 aaPredicted RBP13.55□□□□□ -0.24
CBX3-203ENST00000409747 KRT15P19012 456 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 NT5EP21589 574 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 XKP51811 444 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 SLC25A35Q3KQZ1 300 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 LGSNQ5TDP6 509 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 NEIL3Q8TAT5 605 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 OR10A5Q9H207 317 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 ALKBH4Q9NXW9 302 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 SPRR3Q9UBC9 169 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 TNFRSF10DQ9UBN6 386 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 SLC12A4Q9UP95 1085 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 CFL2Q9Y281 166 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 NPFFR2Q9Y5X5 522 aa13.55□□□□□ -0.24
CBX3-203ENST00000409747 ANKRD17O75179 2603 aaKnown RBP13.54□□□□□ -0.24
CBX3-203ENST00000409747 A0A0G2JNJ9 132 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 TRIM49D1C9J1S8 452 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 CDH16O75309 829 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 SNRPAP09012 282 aaKnown RBP13.54□□□□□ -0.24
CBX3-203ENST00000409747 RFPL3SP0C7P2 107 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 CTAGE8P0CG41 777 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 ENDOUP21128 410 aaKnown RBP13.54□□□□□ -0.24
CBX3-203ENST00000409747 GDF1P27539 372 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
CBX3-203ENST00000409747 RIPPLY2Q5TAB7 128 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 RTL6Q6ICC9 239 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 SLC48A1Q6P1K1 146 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 COMMD6Q7Z4G1 85 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 PACS2Q86VP3 889 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 CTAGE4Q8IX94 777 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 VWA5B2Q8N398 1253 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 ZNF615Q8N8J6 731 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 ZNF483Q8TF39 744 aaPredicted RBP13.54□□□□□ -0.24
CBX3-203ENST00000409747 DCAKDQ8WVC6 231 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 SELENOMQ8WWX9 145 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 ZNF559Q9BR84 538 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 C1QTNF3Q9BXJ4 246 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 PROK2Q9HC23 129 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 Q9UFV3 132 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 TRPS1Q9UHF7 1281 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 ITGB1BP2Q9UKP3 347 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 PSME2Q9UL46 239 aa13.54□□□□□ -0.24
CBX3-203ENST00000409747 EXOC1LA0A1B0GW35 172 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 TRIM3O75382 744 aaPredicted RBP13.53□□□□□ -0.24
CBX3-203ENST00000409747 TAC1P20366 129 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 MASP1P48740 699 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 KRTAP10-9P60411 292 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 SGO1Q5FBB7 561 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 CES4AQ5XG92 561 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 LCA5Q86VQ0 697 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 NOA1Q8NC60 698 aaKnown RBP13.53□□□□□ -0.24
CBX3-203ENST00000409747 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 ZNF592Q92610 1267 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 UCN3Q969E3 161 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 ADIPOR1Q96A54 375 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 MTBPQ96DY7 904 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 RILPQ96NA2 401 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 FAIM2Q9BWQ8 316 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 SLC6A15Q9H2J7 730 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 PCDHA9Q9Y5H5 950 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 POLQO75417 2590 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 A0A1W2PS29 197 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 A8MT66 165 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 PDYNP01213 254 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 ATP1B1P05026 303 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 CT62P0C5K7 136 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 HSD3B1P14060 373 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 NAGAP17050 411 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 HSD3B2P26439 372 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 ECHS1P30084 290 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 PEX19P40855 299 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 FBXW4P57775 412 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 TRA2BP62995 288 aaKnown RBP13.53□□□□□ -0.24
CBX3-203ENST00000409747 SF3B4Q15427 424 aaKnown RBP eCLIP13.53□□□□□ -0.244e-17■□□□□ 8.6
CBX3-203ENST00000409747 LETMD1Q6P1Q0 360 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 PM20D2Q8IYS1 436 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 ULK2Q8IYT8 1036 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 ANGPTL4Q9BY76 406 aa13.53□□□□□ -0.24
CBX3-203ENST00000409747 C15orf38-AP3S2A0A0A6YYH1 394 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 HSPB2A8KAH6 182 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 LRATO95237 230 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 ABHD2P08910 425 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 CSNK2A2P19784 350 aaPredicted RBP13.52□□□□□ -0.25
CBX3-203ENST00000409747 POU3F2P20265 443 aaPredicted RBP13.52□□□□□ -0.25
CBX3-203ENST00000409747 ABCD3P28288 659 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 TRPC1P48995 793 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 GALNT1Q10472 559 aaPredicted RBP13.52□□□□□ -0.25
CBX3-203ENST00000409747 MYBPHQ13203 477 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 RASA2Q15283 850 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 HSPB2Q16082 182 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 TMEM64Q6YI46 380 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 LRRC46Q96FV0 321 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 BRINP2Q9C0B6 783 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 FARSBQ9NSD9 589 aaKnown RBP13.52□□□□□ -0.25
CBX3-203ENST00000409747 CES1P1Q9UKY3 287 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 STK38LQ9Y2H1 464 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 ZNF780BQ9Y6R6 833 aa13.52□□□□□ -0.25
CBX3-203ENST00000409747 INTS1Q8N201 2190 aaKnown RBP13.51□□□□□ -0.25
CBX3-203ENST00000409747 NCKAP5O14513 1909 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms