RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 B4GALT7Q9UBV7 327 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 MCM8Q9UJA3 840 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF225Q9UK10 706 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 CROCCQ5TZA2 2017 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 FIGNL2A6NMB9 653 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 WASHC1A8K0Z3 465 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 HRKO00198 91 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 PPP6CO00743 305 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 AQP7O14520 342 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 ZNF354AO60765 605 aaPredicted RBP13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 GLRA3O75311 464 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 OR4F21O95013 312 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 FAM153BP0C7A2 387 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 CCL3P10147 92 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 COX6B1P14854 86 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 HMOX2P30519 316 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 KCNJ2P63252 427 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 HEPACAMQ14CZ8 416 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 FAM153CQ494X1 144 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 TMEM198Q66K66 360 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 GALNT18Q6P9A2 607 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 CD163Q86VB7 1156 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 TMEM251Q8N6I4 163 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 ZNF615Q8N8J6 731 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 CDYL2Q8N8U2 506 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 RDH11Q8TC12 318 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 RND1Q92730 232 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 METTL2AQ96IZ6 378 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 GAL3ST4Q96RP7 486 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 SPOCK3Q9BQ16 436 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 LDAHQ9H6V9 325 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 FARSBQ9NSD9 589 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
NIF3L1-205ENST00000409588 PINLYPA6NC86 204 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 ENO4A6NNW6 628 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 ACOX3O15254 700 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 WDR1O75083 606 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 PDE9AO76083 593 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 CLPSP04118 112 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 MYL2P10916 166 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 GABRA1P14867 456 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 NT5EP21589 574 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 CRHR1P34998 444 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 MAGEA5P43359 124 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 MAN2A2P49641 1150 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 NR0B1P51843 470 aaKnown RBP13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 DNAJB13P59910 316 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 RPS6KA2Q15349 733 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 SF3B4Q15427 424 aaKnown RBP eCLIP13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 TMEM81Q6P7N7 255 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 TRILQ7L0X0 811 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 LRRC25Q8N386 305 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 VWA5B2Q8N398 1253 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 C1orf52Q8N6N3 182 aaKnown RBP13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 FAM13CQ8NE31 585 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 LILRB4Q8NHJ6 448 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 MZB1Q8WU39 189 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 ADIPOR1Q96A54 375 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 CTHRC1Q96CG8 243 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 TMEM237Q96Q45 408 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 L2HGDHQ9H9P8 463 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 SLC24A3Q9HC58 644 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 TUBA8Q9NY65 449 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 EHD3Q9NZN3 535 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 PRODH2Q9UF12 536 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 ZNF639Q9UID6 485 aa13.38□□□□□ -0.27
NIF3L1-205ENST00000409588 CACNA1DQ01668 2161 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 TRGV5A0A0B4J1U4 118 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 A0A1B0GTL3 188 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 FAM166BA8MTA8 275 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 NPIPA2E9PIF3 369 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 ERAL1O75616 437 aaKnown RBP13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 KRT15P19012 456 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 S1PR1P21453 382 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 DRD5P21918 477 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 ACVR2AP27037 513 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 CHRNB4P30926 498 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 SSTR4P31391 388 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 MPIP34949 423 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 PIGAP37287 484 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 DNASE1L1P49184 302 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 SNTA1Q13424 505 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 PRICKLE4Q2TBC4 344 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 WLSQ5T9L3 541 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 SH2D5Q6ZV89 423 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 RPS27LQ71UM5 84 aaKnown RBP13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 MCEMP1Q8IX19 187 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 FAM76AQ8TAV0 307 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 UCN3Q969E3 161 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 SDCCAG3Q96C92 435 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 DTNBP1Q96EV8 351 aa13.37□□□□□ -0.27
NIF3L1-205ENST00000409588 SMC6Q96SB8 1091 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms