RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ATP6V1G1O75348 118 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 HNRNPA2B1P22626 353 aaKnown RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 HNRNPKP61978 463 aaKnown RBP eCLIP17.31■□□□□ 0.363e-7■■■■□ 20.9
COL18A1-204ENST00000400337 SPHARQ15513 63 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 SLC5A8Q8N695 610 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 NEIL2Q969S2 332 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 FRMD6Q96NE9 622 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 ZBTB20Q9HC78 741 aaPredicted RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 HCN2Q9UL51 889 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 PRSS21Q9Y6M0 314 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 GPR37L1O60883 481 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 THOC7Q6I9Y2 204 aaKnown RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 KCTD18Q6PI47 426 aaPredicted RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 ZNF852Q6ZMS4 543 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 TEX26Q8N6G2 289 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 ISG20Q96AZ6 181 aaKnown RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 LGALS12Q96DT0 336 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 SCGB3A2Q96PL1 93 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 PPP4R1LQ9P1A2 415 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 PCDHGA3Q9Y5H0 932 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CITO14578 2027 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 HYKKA2RU49 373 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 HTR3EA5X5Y0 456 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 SLC1A7O00341 560 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 UGDHO60701 494 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 KDM4BO94953 1096 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 RBM34P42696 430 aaKnown RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 RABIFP47224 123 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CDKL1Q00532 357 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 RPS26P11Q5JNZ5 115 aaPredicted RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CDKL4Q5MAI5 379 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 DPPA4Q7L190 304 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CEACAM19Q7Z692 300 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 ACVR1CQ8NER5 493 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CXCL16Q9H2A7 254 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 ZNF696Q9H7X3 374 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 FBRSQ9HAH7 460 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 ARNT2Q9HBZ2 717 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CLEC3AO75596 197 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 BMP2P12643 396 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 PARS2Q7L3T8 475 aaKnown RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 FOXRED2Q8IWF2 684 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 OR4K5Q8NGD3 323 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 KCNK13Q9HB14 408 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CNOT11Q9UKZ1 510 aaKnown RBP17.31■□□□□ 0.36
COL18A1-204ENST00000400337 MGAT4AQ9UM21 535 aa17.31■□□□□ 0.36
COL18A1-204ENST00000400337 CHP2O43745 196 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 YES1P07947 543 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ACTC1P68032 377 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ACTA1P68133 377 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 HSD17B12Q53GQ0 312 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 C22orf42Q6IC83 251 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 CENPSQ8N2Z9 138 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 FRS2Q8WU20 508 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 THRSPQ92748 146 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 NPLQ9BXD5 320 aaPredicted RBP17.3■□□□□ 0.36
COL18A1-204ENST00000400337 MROQ9BYG7 248 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 SLC6A15Q9H2J7 730 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 FXYD6-FXYD2A0A087WZ82 144 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 DNAJB5O75953 348 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 GCAP28676 217 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ARPC4P59998 168 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 LIPIQ6XZB0 460 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 PLCZ1Q86YW0 608 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 FAM3CQ92520 227 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 FAM46AQ96IP4 442 aaKnown RBP17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ZFYVE21Q9BQ24 234 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 CPEB1Q9BZB8 566 aaKnown RBP17.3■□□□□ 0.36
COL18A1-204ENST00000400337 STRADBQ9C0K7 418 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 FXYD6Q9H0Q3 95 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 RMI1Q9H9A7 625 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 A0A0G2JPF8 293 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 HNRNPCL3B7ZW38 293 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 HNRNPCL4P0DMR1 293 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 CST5P28325 142 aaPredicted RBP17.3■□□□□ 0.36
COL18A1-204ENST00000400337 CTSCP53634 463 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 GNG2P59768 71 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ZNF33BQ06732 778 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 TRMT2BQ96GJ1 504 aaKnown RBP17.3■□□□□ 0.36
COL18A1-204ENST00000400337 BRF2Q9HAW0 419 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 GPR83Q9NYM4 423 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 FBXO9Q9UK97 447 aaPredicted RBP17.3■□□□□ 0.36
COL18A1-204ENST00000400337 GXYLT2A0PJZ3 443 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 SDC1P18827 310 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 GPX3P22352 226 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ACVR1BP36896 505 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ZNF45Q02386 682 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 CGB2Q6NT52 195 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 KLBQ86Z14 1044 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 SGCDQ92629 289 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 MSLNLQ96KJ4 702 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 RDH14Q9HBH5 336 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 VNN3Q9NY84 501 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ENPP4Q9Y6X5 453 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 ADAMTSL3P82987 1691 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 KANTRA0A1W2PQU2 76 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 SOX30O94993 753 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 IFNA21P01568 189 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 PRKCAP17252 672 aa17.3■□□□□ 0.36
COL18A1-204ENST00000400337 PGCP20142 388 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms