RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 RPF2Q9H7B2 306 aaKnown RBP7.65□□□□□ -1.18
SCFD1-202ENST00000396629 MS4A12Q9NXJ0 267 aa7.65□□□□□ -1.18
SCFD1-202ENST00000396629 ELOVL5Q9NYP7 299 aa7.65□□□□□ -1.18
SCFD1-202ENST00000396629 RNF112Q9ULX5 631 aa7.65□□□□□ -1.18
SCFD1-202ENST00000396629 TAPBPO15533 448 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TTC4O95801 387 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TGM6O95932 706 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 RHOXF2BP0C7M4 288 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 GGT5P36269 586 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 LHX2P50458 406 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 GFRA1P56159 465 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SRYQ05066 204 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 LAPTM5Q13571 262 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SETDB1Q15047 1291 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 AP5B1Q2VPB7 878 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SPANXN3Q5MJ09 141 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TEDDM1Q5T9Z0 273 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 VWA1Q6PCB0 445 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 ANGPTL8Q6UXH0 198 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 C22orf34Q6ZV56 151 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 ZNF550Q7Z398 422 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TRIM42Q8IWZ5 723 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 NKAPQ8N5F7 415 aaKnown RBP7.64□□□□□ -1.19
SCFD1-202ENST00000396629 NAT8LQ8N9F0 302 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 ZNF473Q8WTR7 871 aaKnown RBP7.64□□□□□ -1.19
SCFD1-202ENST00000396629 RIT1Q92963 219 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 ADIPOR1Q96A54 375 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 PGM2Q96G03 612 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 FAM111AQ96PZ2 611 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 EFCAB11Q9BUY7 163 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 REG4Q9BYZ8 158 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 YAE1D1Q9NRH1 226 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 DNAJC11Q9NVH1 559 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SLC17A6Q9P2U8 582 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 C16orf97H3BN30 126 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 PLOD2O00469 737 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 KLF4O43474 513 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SMNDC1O75940 238 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCFD1-202ENST00000396629 GPR75O95800 540 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TP53P04637 393 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-202ENST00000396629 POU2F1P14859 743 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 PTGDSP41222 190 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 CASP2P42575 452 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TNFRSF17Q02223 184 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SLAMF1Q13291 335 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 E2F2Q14209 437 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 CLEC12BQ2HXU8 276 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 C18orf63Q68DL7 685 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 OR4C11Q6IEV9 310 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SLC30A6Q6NXT4 461 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TTC27Q6P3X3 843 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SH2D5Q6ZV89 423 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 BTLAQ7Z6A9 289 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 GPR180Q86V85 440 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 GRAMD2AQ8IUY3 354 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 ZNF611Q8N823 705 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 CAVIN3Q969G5 261 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 CERS2Q96G23 380 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 BAG1Q99933 345 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-202ENST00000396629 SLC39A3Q9BRY0 314 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 TMEM79Q9BSE2 394 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 PHACTR1Q9C0D0 580 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 PHF11Q9UIL8 331 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 PTBP2Q9UKA9 531 aaKnown RBP7.64□□□□□ -1.19
SCFD1-202ENST00000396629 MAPRE3Q9UPY8 281 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 DLGAP4Q9Y2H0 992 aa7.64□□□□□ -1.19
SCFD1-202ENST00000396629 YLPM1P49750 1951 aaKnown RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 FRG2CA6NGY1 282 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 OR10H2O60403 315 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 CBR3O75828 277 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 CGAP01215 116 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 ABCB1P08183 1280 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 NAGAP17050 411 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 TLX1P31314 330 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 SSTR4P31391 388 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 GMPRP36959 345 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 SSR2P43308 183 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 KIR2DL2P43627 348 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 STARP49675 285 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 HNRNPH2P55795 449 aaKnown RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 CLDN18P56856 261 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 NRG3P56975 720 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 TSNQ15631 228 aaKnown RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 TBCCQ15814 346 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 ETFDHQ16134 617 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 HIST2H2ACQ16777 129 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 CHRFAM7AQ494W8 412 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 BEX5Q5H9J7 111 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 PAGE2BQ5JRK9 111 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 HIST2H2AA3Q6FI13 130 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 OR2A2Q6IF42 318 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 ZNF704Q6ZNC4 412 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-202ENST00000396629 FRA10AC1Q70Z53 315 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 MILR1Q7Z6M3 343 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 ADAMTSL2Q86TH1 951 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 TCAIMQ8N3R3 496 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 ZNF615Q8N8J6 731 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 C17orf47Q8NEP4 570 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 HGDQ93099 445 aa7.63□□□□□ -1.19
SCFD1-202ENST00000396629 OPN3Q9H1Y3 402 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms