RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 GANABQ14697 944 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 HFEQ30201 348 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 FBXO47Q5MNV8 452 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR2T5Q6IEZ7 315 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 LCN8Q6JVE9 175 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZNF549Q6P9A3 640 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ATRAIDQ6UW56 229 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 CYS1Q717R9 158 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 C16orf59Q7L2K0 433 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ADGRG3Q86Y34 549 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 SERPINA12Q8IW75 414 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 STPG2Q8N412 459 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 HDDC3Q8N4P3 179 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 NPWQ8N729 165 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 LRRC52Q8N7C0 313 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 C11orf65Q8NCR3 313 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR7D4Q8NG98 312 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR2T29Q8NH02 315 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 MRPL48Q96GC5 212 aaKnown RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 OR5M11Q96RB7 305 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ZNF300Q96RE9 604 aaPredicted RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 LRFN3Q9BTN0 628 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 FAM124BQ9H5Z6 455 aaPredicted RBP8.04□□□□□ -1.12
NDE1-202ENST00000396355 CRLF2Q9HC73 371 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 COL1A2P08123 1366 aa8.04□□□□□ -1.12
NDE1-202ENST00000396355 ARGFXA6NJG6 315 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 OR1I1O60431 355 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 TPST2O60704 377 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 NCR1O76036 304 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 FABP3P05413 133 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 IRF8Q02556 426 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 CDH17Q12864 832 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 SNTB1Q13884 538 aaKnown RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 FBXO43Q4G163 708 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 SLC27A1Q6PCB7 646 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 IL20RBQ6UXL0 311 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 TRMT11Q7Z4G4 463 aaKnown RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 SPRED1Q7Z699 444 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 KDF1Q8NAX2 398 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 DBF4BQ8NFT6 615 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 PAQR8Q8TEZ7 354 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 AUTS2Q8WXX7 1259 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 NT5C3BQ969T7 300 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 RRNAD1Q96FB5 475 aaKnown RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 PEX11GQ96HA9 241 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 RDH12Q96NR8 316 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 PTDSS2Q9BVG9 487 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 MFSD1Q9H3U5 465 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 GPN1Q9HCN4 374 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 TVP23BQ9NYZ1 205 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 ANGPT4Q9Y264 503 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 PCDHGB7Q9Y5F8 929 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 ASCC3Q8N3C0 2202 aaKnown RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 CASTOR2A6NHX0 329 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 ADAM11O75078 769 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 RGS9O75916 674 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 UCHL1P09936 223 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 PCSK2P16519 638 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 ANXA7P20073 488 aaKnown RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 PURAQ00577 322 aaKnown RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 ZNF91Q05481 1191 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 SLC25A52Q3SY17 297 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 RNF212Q495C1 297 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 ZNF529Q6P280 563 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 VTCN1Q7Z7D3 282 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 UNC93AQ86WB7 457 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 NUDT13Q86X67 352 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 TGIF2LXQ8IUE1 241 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 SPATA2LQ8IUW3 424 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 CHPFQ8IZ52 775 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 CRYBG2Q8N1P7 616 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 FAM86B1Q8N7N1 296 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 TBX5Q99593 518 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 RHOJQ9H4E5 214 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 ANKRD19PQ9H560 264 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 UBE2ZQ9H832 354 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 SLC13A4Q9UKG4 626 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 AP1M2Q9Y6Q5 423 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 TRBV23OR9-2A0A075B6M9 112 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 A0A087X0M5 115 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 SMIM28A0A1B0GU29 152 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 A0A1B0GVM2 712 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 A0A1B0GX30 115 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 TVP23AA6NH52 213 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 ANXA2P2A6NMY6 339 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 C5orf58C9J3I9 102 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 G3V2L1 256 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 GMFGO60234 142 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 KRT33AO76009 404 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 CFDP00746 253 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 F12P00748 615 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 RB1P06400 928 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 HLA-EP13747 358 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 NDUFB7P17568 137 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 CST5P28325 142 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 CAMK2GQ13555 558 aaPredicted RBP8.03□□□□□ -1.12
NDE1-202ENST00000396355 DPY19L1Q2PZI1 675 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 PRSS36Q5K4E3 855 aa8.03□□□□□ -1.12
NDE1-202ENST00000396355 DPPA4Q7L190 304 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms