RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TGFB1P01137 390 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PEPDP12955 493 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 NPR2P20594 1047 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PRPS1L1P21108 318 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PTX3P26022 381 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 RORAP35398 523 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TGFBR1P36897 503 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 MAGEA12P43365 314 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 GZMKP49863 264 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PRKAG1P54619 331 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CTBSQ01459 385 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 IFITM3Q01628 133 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SMN1Q16637 294 aaKnown RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 C6orf136Q5SQH8 315 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 BCL2L15Q5TBC7 163 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 LRRN1Q6UXK5 716 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 MFSD4AQ8N468 514 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 FBXL6Q8N531 539 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TP53I13Q8NBR0 393 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 TTLQ8NG68 377 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SETD7Q8WTS6 366 aaKnown RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 GATAD2BQ8WXI9 593 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 GTPBP3Q969Y2 492 aaKnown RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 COQ8BQ96D53 544 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 NXPE2Q96DL1 559 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 IL4I1Q96RQ9 567 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CSF3RQ99062 836 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 FXYD6Q9H0Q3 95 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 GPN1Q9HCN4 374 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 THAP10Q9P2Z0 257 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 NDOR1Q9UHB4 597 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 KLHL21Q9UJP4 597 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ALG5Q9Y673 324 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 A0A1W2PQL4 384 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 C5orf67F2Z3F1 127 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 YKT6O15498 198 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 FABP7O15540 132 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TRIM3O75382 744 aaPredicted RBP5.42□□□□□ -1.54
RFFL-202ENST00000394597 CREG1O75629 220 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 C1QBP02746 253 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CCR7P32248 378 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 DCTP40126 519 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 RAB5BP61020 215 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ADAM15Q13444 863 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 HEPACAMQ14CZ8 416 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CTF1Q16619 201 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 SPIN4Q56A73 249 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 IRAK1BP1Q5VVH5 260 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 NXNL2Q5VZ03 156 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PARM1Q6UWI2 310 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ENPP6Q6UWR7 440 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 MBOAT1Q6ZNC8 495 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PRSS42Q7Z5A4 293 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ANKRD46Q86W74 232 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PDZD9Q8IXQ8 264 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 LHFPL5Q8TAF8 219 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TANKQ92844 425 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 COL26A1Q96A83 441 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CMTM7Q96FZ5 175 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 WDR92Q96MX6 357 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ATOH8Q96SQ7 321 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PFDN5Q99471 154 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ABCG5Q9H222 651 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TBC1D17Q9HA65 648 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 RDH14Q9HBH5 336 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 PRSS16Q9NQE7 514 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 KLHL28Q9NXS3 571 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 TAC3Q9UHF0 121 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 DNAJC15Q9Y5T4 150 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 ZNF780BQ9Y6R6 833 aa5.42□□□□□ -1.54
RFFL-202ENST00000394597 CIB4A0PJX0 185 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 PCDH7O60245 1069 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RP2O75695 350 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ADORA3P0DMS8 318 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 G6PDP11413 515 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 JUPP14923 745 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 AOAHP28039 575 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 STXBP1P61764 594 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 MRPS21P82921 87 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 FLI1Q01543 452 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 RIPPLY1Q0D2K3 151 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 COL28A1Q2UY09 1125 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 NDUFAF6Q330K2 333 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CYP27C1Q4G0S4 372 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CES4AQ5XG92 561 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 SUSD1Q6UWL2 747 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CEP68Q76N32 757 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ZNF765Q7L2R6 523 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TSPYL5Q86VY4 417 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 TMEM17Q86X19 198 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TSPEARQ8WU66 669 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 NXPE3Q969Y0 559 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ARRDC3Q96B67 414 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RHBDF1Q96CC6 855 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 KLHDC7BQ96G42 594 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 LRCH3Q96II8 777 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 OR2M4Q96R27 311 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 LIN7BQ9HAP6 207 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CYP8B1Q9UNU6 501 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 YBX2Q9Y2T7 364 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms