RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 RIPPLY2Q5TAB7 128 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 CES4AQ5XG92 561 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 DGAT2L6Q6ZPD8 337 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-202ENST00000381208 PLD6Q8N2A8 252 aaKnown RBP11.94□□□□□ -0.5
RPAIN-202ENST00000381208 METTL4Q8N3J2 472 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 OR10G3Q8NGC4 313 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 OR52B6Q8NGF0 335 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 NEIL3Q8TAT5 605 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 SREK1Q8WXA9 508 aaKnown RBP11.94□□□□□ -0.5
RPAIN-202ENST00000381208 DIO2Q92813 273 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 LRRC46Q96FV0 321 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF597Q96LX8 424 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 C1QTNF3Q9BXJ4 246 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 CNOT11Q9UKZ1 510 aaKnown RBP11.94□□□□□ -0.5
RPAIN-202ENST00000381208 LIPGQ9Y5X9 500 aa11.94□□□□□ -0.5
RPAIN-202ENST00000381208 A0A087WUV0 522 aaPredicted RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 AHRRA9YTQ3 701 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 C3orf80F5H4A9 247 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 PGRMC2O15173 223 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 PRKRAO75569 313 aaKnown RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 KLK1P06870 262 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 RPS17P08708 135 aaKnown RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 SNRPAP09012 282 aaKnown RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 CTAGE8P0CG41 777 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 GLI4P10075 376 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 HSD3B1P14060 373 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 CPMP14384 443 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 KRT15P19012 456 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 TAC1P20366 129 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 NT5EP21589 574 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 HSD3B2P26439 372 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 XKP51811 444 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 NR0B1P51843 470 aaKnown RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 MAPK12P53778 367 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 TRA2BP62995 288 aaKnown RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 PRAMEF20Q5VT98 475 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 CCDC71Q8IV32 467 aaPredicted RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 CTAGE4Q8IX94 777 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 PM20D2Q8IYS1 436 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 RPRMLQ8N4K4 120 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 MTBPQ96DY7 904 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 DTNBP1Q96EV8 351 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 PKNOX2Q96KN3 472 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 CDK15Q96Q40 435 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF559Q9BR84 538 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 FAIM2Q9BWQ8 316 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 UCK2Q9BZX2 261 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 OR10A5Q9H207 317 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 ZBTB26Q9HCK0 441 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 SEMA4BQ9NPR2 832 aaPredicted RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 FAM215AQ9Y5M1 114 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 NPFFR2Q9Y5X5 522 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 TEP1Q99973 2627 aaKnown RBP11.93□□□□□ -0.5
RPAIN-202ENST00000381208 DCHS2Q6V1P9 2916 aa11.93□□□□□ -0.5
RPAIN-202ENST00000381208 NKX2-6A6NCS4 301 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 LRRC3CA6NJW4 275 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 HSPB2A8KAH6 182 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TRIM49D1C9J1S8 452 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TRIM3O75382 744 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 HSPB2Q16082 182 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 RTL6Q6ICC9 239 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 SLC48A1Q6P1K1 146 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 CDH24Q86UP0 819 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 SAMD14Q8IZD0 417 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF615Q8N8J6 731 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 OR4F6Q8NGB9 312 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 SPPL2AQ8TCT8 520 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 SELENOMQ8WWX9 145 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 IFT81Q8WYA0 676 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ADIPOR1Q96A54 375 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 JSRP1Q96MG2 331 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 MRPL1Q9BYD6 325 aaKnown RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 PROK2Q9HC23 129 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ZNF358Q9NW07 568 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TEX10Q9NXF1 929 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ALKBH4Q9NXW9 302 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TRPS1Q9UHF7 1281 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 DMGDHQ9UI17 866 aaKnown RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 NFU1Q9UMS0 254 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 SLC12A4Q9UP95 1085 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 STK38LQ9Y2H1 464 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 PCDHA9Q9Y5H5 950 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 PDZD2O15018 2839 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 TACC2O95359 2948 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 WASHC1A8K0Z3 465 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 POC1B-GALNT4F8VUJ3 575 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ACOX3O15254 700 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 BCAS2O75934 225 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 KRT6AP02538 564 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 GBAP04062 536 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 CLPSP04118 112 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 KRT6BP04259 564 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ATP1B1P05026 303 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 ABHD2P08910 425 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 CELA3AP09093 270 aa11.92□□□□□ -0.5
RPAIN-202ENST00000381208 CSNK2A2P19784 350 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-202ENST00000381208 GDF1P27539 372 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms