RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 B3GALT2O43825 422 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 HMGN2P05204 90 aaKnown RBP21.77■■□□□ 1.08
VPS16-201ENST00000380443 H1F0P07305 194 aaKnown RBP21.77■■□□□ 1.08
VPS16-201ENST00000380443 KRT20P35900 424 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 LIM2P55344 173 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 UBE2IP63279 158 aaKnown RBP21.77■■□□□ 1.08
VPS16-201ENST00000380443 TNFRSF17Q02223 184 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 CYP27C1Q4G0S4 372 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 DCST1Q5T197 706 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 APH1BQ8WW43 257 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 MYDGFQ969H8 173 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 NIPSNAP1Q9BPW8 284 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 GPR27Q9NS67 375 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 CPNE7Q9UBL6 633 aa21.77■■□□□ 1.08
VPS16-201ENST00000380443 WARS2Q9UGM6 360 aaKnown RBP21.77■■□□□ 1.08
VPS16-201ENST00000380443 MDC1Q14676 2089 aaKnown RBP21.77■■□□□ 1.08
VPS16-201ENST00000380443 PRAMEF27A3QJZ7 478 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 OR6C74A6NCV1 312 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 DUXAA6NLW8 204 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 FFAR1O14842 300 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 CDK4P11802 303 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 MAGP20916 626 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 ACVR2AP27037 513 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 BLKP51451 505 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 CDC42P60953 191 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 GPR19Q15760 415 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 FCRL6Q6DN72 434 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 AQP11Q8NBQ7 271 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 KCT2Q8NC54 265 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 FAM81AQ8TBF8 368 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 FKBP10Q96AY3 582 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 SIGLEC11Q96RL6 698 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 ZFYVE21Q9BQ24 234 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 PINK1Q9BXM7 581 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 C6orf106Q9H6K1 298 aaPredicted RBP21.76■■□□□ 1.07
VPS16-201ENST00000380443 TRIM45Q9H8W5 580 aaPredicted RBP21.76■■□□□ 1.07
VPS16-201ENST00000380443 SYNPO2LQ9H987 977 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 LYRM4Q9HD34 91 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 ENPP5Q9UJA9 477 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 LRP4O75096 1905 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 TRBV23OR9-2A0A075B6M9 112 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 GSAPA4D1B5 854 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 CHURC1-FNTBB4DL54 471 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 SYT5O00445 386 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 PRKRAO75569 313 aaKnown RBP21.76■■□□□ 1.07
VPS16-201ENST00000380443 POLR2CP19387 275 aaPredicted RBP21.76■■□□□ 1.07
VPS16-201ENST00000380443 CPN2P22792 545 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 FEN1P39748 380 aaKnown RBP21.76■■□□□ 1.07
VPS16-201ENST00000380443 PRKAG1P54619 331 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 PIGFQ07326 219 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 NFATC3Q12968 1075 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 DCTN2Q13561 401 aaKnown RBP21.76■■□□□ 1.07
VPS16-201ENST00000380443 GANABQ14697 944 aaKnown RBP21.76■■□□□ 1.07
VPS16-201ENST00000380443 LAIR1Q6GTX8 287 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 NUP43Q8NFH3 380 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 OR9Q2Q8NGE9 314 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 OR5D16Q8NGK9 328 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 C10orf90Q96M02 699 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 FUNDC2Q9BWH2 189 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 RASSF1Q9NS23 344 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 KCMF1Q9P0J7 381 aa21.76■■□□□ 1.07
VPS16-201ENST00000380443 SPTY2D1-AS1A0A0U1RR47 76 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 GP2P55259 537 aaKnown RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 LASP1Q14847 261 aaKnown RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 ATAD3BQ5T9A4 648 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 TMEM107Q6UX40 140 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 SYT13Q7L8C5 426 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 LRRC25Q8N386 305 aaPredicted RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 RERGQ96A58 199 aaPredicted RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 TOE1Q96GM8 510 aaKnown RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 TRNT1Q96Q11 434 aaKnown RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 DGCR6LQ9BY27 220 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 ACTRT3Q9BYD9 372 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 NAA50Q9GZZ1 169 aaKnown RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 IMPAD1Q9NX62 359 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 PSORS1C1Q9UIG5 152 aa21.75■■□□□ 1.07
VPS16-201ENST00000380443 SNRNP200O75643 2136 aaKnown RBP21.75■■□□□ 1.07
VPS16-201ENST00000380443 A0A0J9YY10 115 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 A0A1W2PRQ8 180 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 SH3D21A4FU49 640 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 WASHC1A8K0Z3 465 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 SLITRK5O94991 958 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 LGI1O95970 557 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 IFI6P09912 130 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 CD6P30203 668 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 ST13P50502 369 aaKnown RBP21.74■■□□□ 1.07
VPS16-201ENST00000380443 CRISP1P54107 249 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 DGCR6Q14129 220 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 SLC22A18ASQ8N1D0 253 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 OR4K14Q8NGD5 310 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 BAHD1Q8TBE0 780 aaPredicted RBP21.74■■□□□ 1.07
VPS16-201ENST00000380443 COL25A1Q9BXS0 654 aaPredicted RBP21.74■■□□□ 1.07
VPS16-201ENST00000380443 UCK2Q9BZX2 261 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 FKBP14Q9NWM8 211 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 WSB2Q9NYS7 404 aaPredicted RBP21.74■■□□□ 1.07
VPS16-201ENST00000380443 SPACA6W5XKT8 324 aa21.74■■□□□ 1.07
VPS16-201ENST00000380443 ZAR1LA6NP61 321 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 CTSVO60911 334 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 INMTO95050 263 aa21.73■■□□□ 1.07
VPS16-201ENST00000380443 BCL10O95999 233 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms