RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CALHM2Q9HA72 323 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SMYD2Q9NRG4 433 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 SNX15Q9NRS6 342 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 C6orf203Q9P0P8 240 aaPredicted RBP16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 EXPH5Q8NEV8 1989 aa16.23■□□□□ 0.19
PDLIM4-202ENST00000379018 ANKRD33BA6NCL7 494 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 C2orf72A6NCS6 295 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 CES2O00748 559 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 EEDO75530 441 aaKnown RBP16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 SNX4O95219 450 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 EPB42P16452 691 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 CASP2P42575 452 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 TMED10P49755 219 aaKnown RBP16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 NAGLUP54802 743 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 NRG3P56975 720 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 RPS13P62277 151 aaKnown RBP16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 BIKQ13323 160 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 KBTBD12Q3ZCT8 623 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 CYP20A1Q6UW02 462 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 LRRC8AQ8IWT6 810 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 COX4I2Q96KJ9 171 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 DACH2Q96NX9 599 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 TUBA1CQ9BQE3 449 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 ANGPTL4Q9BY76 406 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 ALG9Q9H6U8 611 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 UBTD1Q9HAC8 227 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 NSMCE4AQ9NXX6 385 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 JKAMPQ9P055 326 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 TXNDC16Q9P2K2 825 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 OPTCQ9UBM4 332 aa16.22■□□□□ 0.19
PDLIM4-202ENST00000379018 MED12LQ86YW9 2145 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 A0A1W2PR48 441 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 TMPRSS11DO60235 418 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 GOSR1O95249 250 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 WISP3O95389 354 aaPredicted RBP16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 AIFM1O95831 613 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 IL18BPO95998 194 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 GBAP04062 536 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 TCEA1P23193 301 aaKnown RBP16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 SERPINB1P30740 379 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 GCKP35557 465 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 CASP3P42574 277 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 ATP6V0D1P61421 351 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 RPP38P78345 283 aaKnown RBP16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 FRG1Q14331 258 aaKnown RBP16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 CDKL4Q5MAI5 379 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 DESI1Q6ICB0 168 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 GALNT12Q8IXK2 581 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 ZBED8Q8IZ13 594 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 ZNF441Q8N8Z8 693 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 OR1J4Q8NGS1 313 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 PERPQ96FX8 193 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 SFXN3Q9BWM7 321 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 WDR41Q9HAD4 459 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 MOCS1Q9NZB8 636 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 MAPRE3Q9UPY8 281 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 ANGPTL3Q9Y5C1 460 aa16.21■□□□□ 0.19
PDLIM4-202ENST00000379018 TRIM64A6NGJ6 449 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 TRIM64BA6NI03 449 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 CXorf49A8MYA2 514 aaPredicted RBP16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 UBXN8O00124 270 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 SNPHO15079 494 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 CT62P0C5K7 136 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 STMN1P16949 149 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 PTPN6P29350 595 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 PPP2R2BQ00005 443 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 DR1Q01658 176 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 PCDH1Q08174 1060 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 NHSL2Q5HYW2 709 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 C6orf163Q5TEZ5 329 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 GRHL2Q6ISB3 625 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 ZCCHC7Q8N3Z6 543 aaKnown RBP16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 TEX9Q8N6V9 391 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 OR14L1PQ8NHC6 308 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 ISL2Q96A47 359 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 TMEM41AQ96HV5 264 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 GALNT9Q9HCQ5 603 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 SERHLQ9NQF3 203 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 LYARQ9NX58 379 aaKnown RBP16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 NUDT4Q9NZJ9 180 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 EHD3Q9NZN3 535 aa16.2■□□□□ 0.18
PDLIM4-202ENST00000379018 HIVEP2P31629 2446 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 INAFM1C9JVW0 142 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 K7EPI3 171 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 SMNDC1O75940 238 aaKnown RBP eCLIP16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 FAM58BPP0C7Q3 252 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 NT5EP21589 574 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 PIK3R1P27986 724 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 PHEXP78562 749 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 TIGD3Q6B0B8 471 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 RAPH1Q70E73 1250 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 YTHDF3Q7Z739 585 aaKnown RBP16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 ZPLD1Q8TCW7 415 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 SMPDL3BQ92485 455 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 TP53INP1Q96A56 240 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 CCL19Q99731 98 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 TM9SF2Q99805 663 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 MCMBPQ9BTE3 642 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 OR10A5Q9H207 317 aa16.19■□□□□ 0.18
PDLIM4-202ENST00000379018 CXorf21Q9HAI6 301 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms