RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 WSCD2Q2TBF2 565 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 LY6G5CQ5SRR4 150 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SDE2Q6IQ49 451 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 BCDIN3DQ7Z5W3 292 aaKnown RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 Q8N402 240 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 C2orf73Q8N5S3 287 aaPredicted RBP15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 VWCEQ96DN2 955 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 MCUBQ9NWR8 336 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SLC23A1Q9UHI7 598 aa15.74■□□□□ 0.11
PCDHA1-201ENST00000378133 SOX14O95416 240 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 RECKO95980 971 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 IL3P08700 152 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 EIF2B5Q13144 721 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 MAB21L1Q13394 359 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 HIST2H2AA3Q6FI13 130 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ABI3BPQ7Z7G0 1075 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ZBED6CLQ96FA7 236 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 GFM1Q96RP9 751 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 EFCAB11Q9BUY7 163 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 TSSK6Q9BXA6 273 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 IL36AQ9UHA7 158 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 TSC22D2O75157 780 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 IGFBP1P08833 259 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ARAFP10398 606 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 PRKAR1AP10644 381 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 RHCEP18577 417 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 LAG3P18627 525 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 MYL12AP19105 171 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 RPS26P62854 115 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 TAP2Q03519 686 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF91Q05481 1191 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 MRPL28Q13084 256 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 PUM1Q14671 1186 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF805Q5CZA5 627 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF628Q5EBL2 1059 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 RPS26P11Q5JNZ5 115 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 TMIGD1Q6UXZ0 262 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 DUSP18Q8NEJ0 188 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ZC3HAV1LQ96H79 300 aaKnown RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 MRGPRX3Q96LB0 322 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 KCTD7Q96MP8 289 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 MYNNQ9NPC7 610 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 SPHK2Q9NRA0 654 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 COMMD3Q9UBI1 195 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 MALT1Q9UDY8 824 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 ANGPT4Q9Y264 503 aa15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 DNMT3AQ9Y6K1 912 aaPredicted RBP15.73■□□□□ 0.11
PCDHA1-201ENST00000378133 WASHC1A8K0Z3 465 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 H3BN98 237 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 FFAR1O14842 300 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 HCN1O60741 890 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 IFNW1P05000 195 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 NAGAP17050 411 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 SYN1P17600 705 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 NNMTP40261 264 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 MAPK12P53778 367 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 PNLIPRP1P54315 467 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 RRAS2P62070 204 aaPredicted RBP15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 NFE2L1Q14494 772 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 ZNF770Q6IQ21 691 aaPredicted RBP15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 CASP12Q6UXS9 341 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 DPPA4Q7L190 304 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 WDR53Q7Z5U6 358 aaPredicted RBP15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 PDZD3Q86UT5 571 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 TRAPPC5Q8IUR0 188 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 OR8H1Q8NGG4 311 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 AP3S1Q92572 193 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 QRFPRQ96P65 431 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 RC3H2Q9HBD1 1191 aaKnown RBP15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 MIEF1Q9NQG6 463 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 B3GNT2Q9NY97 397 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 MAFFQ9ULX9 164 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 OSMP13725 252 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 LIM2P55344 173 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 DSTNP60981 165 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 CNKSR3Q6P9H4 555 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 NXPE4Q6UWF7 544 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 TRMT11Q7Z4G4 463 aaKnown RBP15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 TCEANCQ8N8B7 351 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 OR9A1PQ8NGU1 263 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 SLC5A11Q8WWX8 675 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 C1GALT1C1Q96EU7 318 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 TRAF4Q9BUZ4 470 aaPredicted RBP15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 SGPP1Q9BX95 441 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 OR2AG1Q9H205 316 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 CXorf36Q9H7Y0 433 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 TAAR2Q9P1P5 351 aa15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 NFKBIL1Q9UBC1 381 aaPredicted RBP15.72■□□□□ 0.11
PCDHA1-201ENST00000378133 DSPPQ9NZW4 1301 aa15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 PLXND1Q9Y4D7 1925 aa15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 TRBV4-1A0A0J9YWV2 114 aa15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 K7ESM1 405 aa15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 LYRM1O43325 122 aa15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 SRPRAP08240 638 aaKnown RBP15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 CTRB1P17538 263 aa15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 POU3F3P20264 500 aaPredicted RBP15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 RPL3P39023 403 aaKnown RBP15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 GSTM5P46439 218 aa15.71■□□□□ 0.11
PCDHA1-201ENST00000378133 TOR2AQ5JU69 321 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms