RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 COX10Q12887 443 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 GINS1Q14691 196 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 MLC1Q15049 377 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 ZMAT1Q5H9K5 638 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 USP30Q70CQ3 517 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 ZER1Q7Z7L7 766 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 MMAAQ8IVH4 418 aaKnown RBP23.9■■□□□ 1.42
C9orf40-201ENST00000376854 ETFBKMTQ8IXQ9 262 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 OR4K5Q8NGD3 323 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 OR52I1Q8NGK6 324 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 SETD6Q8TBK2 473 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 OTUB1Q96FW1 271 aaPredicted RBP23.9■■□□□ 1.42
C9orf40-201ENST00000376854 TPK1Q9H3S4 243 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 NT5DC2Q9H857 520 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 MOV10Q9HCE1 1003 aaKnown RBP23.9■■□□□ 1.42
C9orf40-201ENST00000376854 ZDHHC4Q9NPG8 344 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 ZCCHC3Q9NUD5 404 aaKnown RBP23.9■■□□□ 1.42
C9orf40-201ENST00000376854 ADAM29Q9UKF5 820 aa23.9■■□□□ 1.42
C9orf40-201ENST00000376854 DIMT1Q9UNQ2 313 aaKnown RBP23.9■■□□□ 1.42
C9orf40-201ENST00000376854 GJA8P48165 433 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 SYT14P1Q58G82 188 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 FAM46CQ5VWP2 391 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 RSBN1Q5VWQ0 802 aaPredicted RBP23.89■■□□□ 1.42
C9orf40-201ENST00000376854 METRNLQ641Q3 311 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 OR4C11Q6IEV9 310 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 CD300LDQ6UXZ3 194 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 NRARPQ7Z6K4 114 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 HMGN2P46Q86SG4 172 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 ZNF513Q8N8E2 541 aaPredicted RBP23.89■■□□□ 1.42
C9orf40-201ENST00000376854 LRR1Q96L50 414 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 DDX31Q9H8H2 851 aaKnown RBP23.89■■□□□ 1.42
C9orf40-201ENST00000376854 SLC9A8Q9Y2E8 581 aa23.89■■□□□ 1.42
C9orf40-201ENST00000376854 LCMT2O60294 686 aaKnown RBP23.89■■□□□ 1.41
C9orf40-201ENST00000376854 RAB36O95755 333 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 PCCBP05166 539 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 PSPHP78330 225 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 NDUFA9Q16795 377 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 ADAMTSL4Q6UY14 1074 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 RTL10Q7L3V2 364 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 ADCK2Q7Z695 626 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 IQCHQ86VS3 1027 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 PSD4Q8NDX1 1056 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 AMDHD1Q96NU7 426 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 DPH7Q9BTV6 452 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 LGR4Q9BXB1 951 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 MAN2C1Q9NTJ4 1040 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 TAS2R7Q9NYW3 318 aa23.89■■□□□ 1.41
C9orf40-201ENST00000376854 WASHC1A8K0Z3 465 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 PPM1DO15297 605 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 GIPRP48546 466 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 LSM11P83369 360 aaKnown RBP eCLIP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 MXD1Q05195 221 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 SF3B4Q15427 424 aaKnown RBP eCLIP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 NDUFAF5Q5TEU4 345 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 ACSM5Q6NUN0 579 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 WASH2PQ6VEQ5 465 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF582Q96NG8 517 aaPredicted RBP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 WDFY2Q96P53 400 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 PITHD1Q9GZP4 211 aaPredicted RBP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 NPAP1Q9NZP6 1156 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 ETV5P41161 510 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 P2RY2P41231 377 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 SSR2P43308 183 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 ETV1P50549 477 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF234Q14588 700 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 LARS2Q15031 903 aaKnown RBP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF79Q15937 498 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 CCDC92Q53HC0 331 aaPredicted RBP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 SLC25A30Q5SVS4 291 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 C12orf76Q8N812 135 aaPredicted RBP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 OR6T1Q8NGN1 323 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 ZNF486Q96H40 463 aaPredicted RBP23.88■■□□□ 1.41
C9orf40-201ENST00000376854 GPA33Q99795 319 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 C17orf62Q9BQA9 187 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 CMAHPQ9Y471 501 aa23.88■■□□□ 1.41
C9orf40-201ENST00000376854 A0A0A6YYD5 115 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 IQCMA0A1B0GVH7 501 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 CDRT1O95170 752 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 EPHX1P07099 455 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 AZGP1P25311 298 aaKnown RBP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 NCBP2P52298 156 aaKnown RBP eCLIP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 PRKAG1P54619 331 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 CSNK1G2P78368 415 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 ARMC4Q5T2S8 1044 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 UBQLNLQ8IYU4 475 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 LINC01555Q8NAE3 123 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 SP7Q8TDD2 431 aaPredicted RBP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 CAPSLQ8WWF8 208 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 NEK6Q9HC98 313 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 TXNL4BQ9NX01 149 aaKnown RBP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 ZSCAN32Q9NX65 697 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 TESQ9UGI8 421 aaKnown RBP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 NUP210Q8TEM1 1887 aaPredicted RBP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 PLD2O14939 933 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 EPPINO95925 133 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 KRT8P05787 483 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 HNRNPA1P09651 372 aaKnown RBP eCLIP23.87■■□□□ 1.41
C9orf40-201ENST00000376854 KHKP50053 298 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 CLCNKAP51800 687 aa23.87■■□□□ 1.41
C9orf40-201ENST00000376854 TRA2BP62995 288 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms