RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TXNL4BQ9NX01 149 aaKnown RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 ZNF221Q9UK13 617 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 SLC9A8Q9Y2E8 581 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 GRIP1Q9Y3R0 1128 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 PLXND1Q9Y4D7 1925 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 EDDM13A0A1B0GTR0 161 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 LINC00854A0A1B0GVQ3 168 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 WASHC1A8K0Z3 465 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 LCMT2O60294 686 aaKnown RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 EPHX1P07099 455 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 CHRM5P08912 532 aaPredicted RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 AZGP1P25311 298 aaKnown RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 ETV5P41161 510 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 SLC6A11P48066 632 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 ETV1P50549 477 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 PRKAG1P54619 331 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 LSM11P83369 360 aaKnown RBP eCLIP13.75□□□□□ -0.21
MSH5-201ENST00000375703 REEP5Q00765 189 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 ZNF79Q15937 498 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 UAP1L1Q3KQV9 507 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 TMEM52BQ4KMG9 183 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 NXNL2Q5VZ03 156 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 CD300LDQ6UXZ3 194 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 WASH2PQ6VEQ5 465 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 HMGN2P46Q86SG4 172 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 IQCHQ86VS3 1027 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 ZNF582Q96NG8 517 aaPredicted RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 WDFY2Q96P53 400 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 DPH7Q9BTV6 452 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 TP63Q9H3D4 680 aaPredicted RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 ZCCHC3Q9NUD5 404 aaKnown RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 SLC27A6Q9Y2P4 619 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 IQCMA0A1B0GVH7 501 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 SLC35F4A4IF30 521 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 CEBPBP17676 345 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 GPR50Q13585 617 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 MLC1Q15049 377 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 SNAPC1Q16533 368 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 NDUFA9Q16795 377 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 KLHL22Q53GT1 634 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 ATAT1Q5SQI0 421 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 SLC25A30Q5SVS4 291 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 FAM46CQ5VWP2 391 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 ERN2Q76MJ5 926 aaKnown RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 LRRTM4Q86VH4 590 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 LINC00471Q8N535 108 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 OR6F1Q8NGZ6 308 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 SLC25A46Q96AG3 418 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 OTUB1Q96FW1 271 aaPredicted RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 NELL2Q99435 816 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 NT5DC2Q9H857 520 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 CTPS2Q9NRF8 586 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 TAS2R7Q9NYW3 318 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 TESQ9UGI8 421 aaKnown RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 ADAM29Q9UKF5 820 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 AP3D1O14617 1153 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 PPM1DO15297 605 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 ADH1CP00326 375 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 IL7P13232 177 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 CPEP16870 476 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 RFX2P48378 723 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 CDK5Q00535 292 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 ELAVL3Q14576 367 aaKnown RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 NDUFAF5Q5TEU4 345 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 METRNLQ641Q3 311 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 C22orf42Q6IC83 251 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 ZNF517Q6ZMY9 492 aaPredicted RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 UTS2BQ765I0 119 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 ADCK2Q7Z695 626 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 RAB43Q86YS6 212 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 MMAAQ8IVH4 418 aaKnown RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 OR6T1Q8NGN1 323 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 COX14Q96I36 57 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 AMDHD1Q96NU7 426 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 GPA33Q99795 319 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 YIPF4Q9BSR8 244 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 SPATA5L1Q9BVQ7 753 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 SRRQ9GZT4 340 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 DDX31Q9H8H2 851 aaKnown RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 ABCB9Q9NP78 766 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 CARD8Q9Y2G2 431 aa13.74□□□□□ -0.21
MSH5-201ENST00000375703 SPIN1Q9Y657 262 aaPredicted RBP13.74□□□□□ -0.21
MSH5-201ENST00000375703 LAMA3Q16787 3333 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 A0A1W2PPV9 198 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 IL1AP01583 271 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 FGBP02675 491 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 TSPAN19P0C672 248 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 MYL12AP19105 171 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 NDUFA5Q16718 116 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 C1orf94Q6P1W5 598 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 FAM131AQ6UXB0 335 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 LAPTM4BQ86VI4 370 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 ZNF764Q96H86 408 aaPredicted RBP13.73□□□□□ -0.21
MSH5-201ENST00000375703 MARCH7Q9H992 704 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 SLC35C2Q9NQQ7 365 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 MAN2C1Q9NTJ4 1040 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 N6AMT1Q9Y5N5 214 aa13.73□□□□□ -0.21
MSH5-201ENST00000375703 HOXC11O43248 304 aaPredicted RBP13.73□□□□□ -0.21
MSH5-201ENST00000375703 LGI1O95970 557 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms