RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 VEGFCP49767 419 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 S100A10P60903 97 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 DEFA6Q01524 100 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CD276Q5ZPR3 534 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 GLIS1Q8NBF1 620 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF300Q96RE9 604 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 FEVQ99581 238 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 XYLT2Q9H1B5 865 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 AGAP14A8MT82 685 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 UPK3BL1B0FP48 263 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 UPK3BL2E5RIL1 263 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 GAPDHSO14556 408 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 IMPA2O14732 288 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 SHMT2P34897 504 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 PDSS1Q5T2R2 415 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CDHR3Q6ZTQ4 885 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CIR1Q86X95 450 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 FBXW2Q9UKT8 454 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 NUP98P52948 1817 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CELF2O95319 508 aaKnown RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 MMP2P08253 660 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CPOXP36551 454 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 MECP2P51608 486 aaKnown RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CDNFQ49AH0 187 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 TMED4Q7Z7H5 227 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 BARD1Q99728 777 aaKnown RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 SLC25A21Q9BQT8 299 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 NPFFR2Q9Y5X5 522 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 C5P01031 1676 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ZCWPW2A0A1B0GU75 182 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 MC2RQ01718 297 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 FAM46BQ96A09 425 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 DPEP2Q9H4A9 486 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 MVB12BQ9H7P6 319 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ERVK13-1Q9NX77 482 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 TRAV6A0A075B6T7 132 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 SELPP16109 830 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 FAM182AQ5T1J6 154 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 BCL2L15Q5TBC7 163 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 NETO1Q8TDF5 533 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ISYNA1Q9NPH2 558 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 DNAJC27Q9NZQ0 273 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 SLC6A5Q9Y345 797 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 HES2Q9Y543 173 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CAMTA1Q9Y6Y1 1673 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 RREB1Q92766 1687 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 CSF2P04141 144 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 JUNP05412 331 aaKnown RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 BAK1Q16611 211 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 HIST2H3AQ71DI3 136 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ISCA2Q86U28 154 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 OR4K14Q8NGD5 310 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 OR5K4A6NMS3 321 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 TAS2R19P59542 299 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 C12orf45Q8N5I9 185 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 GGT3PA6NGU5 568 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF705EA8MWA4 302 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 HOXB9P17482 250 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 OR1D2P34982 312 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 BRCC3P46736 316 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 RNF144AP50876 292 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ASAH1Q13510 395 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 PROKR1Q8TCW9 393 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ASIC5Q9NY37 505 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 RGS19P49795 217 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 FAPQ12884 760 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 CNIH2Q6PI25 160 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 OR51G2Q8NGK0 314 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 GATAD2BQ8WXI9 593 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 MALSU1Q96EH3 234 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 WDR26Q9H7D7 661 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 IQCMA0A1B0GVH7 501 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF726A6NNF4 738 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 TCEA1P23193 301 aaKnown RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 PDHA2P29803 388 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 NHSL2Q5HYW2 709 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 DTWD1Q8N5C7 304 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 DBF4BQ8NFT6 615 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 NT5C3BQ969T7 300 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 CTRCQ99895 268 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 PCDHGA8Q9Y5G5 932 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 TRBV2A0A0J9YWF9 115 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 SLC38A8A6NNN8 435 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF878C9JN71 531 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 J3QLW9 94 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF19P17023 458 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 GABRR2P28476 465 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 SSBP1Q04837 148 aaKnown RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ARHGAP1Q07960 439 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 TARBP2Q15633 366 aaKnown RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 SLC39A4Q6P5W5 647 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 RASGRP3Q8IV61 690 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ABCG4Q9H172 646 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 IL36AQ9UHA7 158 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 STSP08842 583 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 ZNF26P17031 533 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-204ENST00000375290 MINDY4Q4G0A6 757 aa9.73□□□□□ -0.85
PTCH1-204ENST00000375290 UBXN11Q5T124 520 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms