RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 STK19P49842 368 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 PTPRCAPQ14761 206 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 PLEKHS1Q5SXH7 462 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 CDHR3Q6ZTQ4 885 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 ARFGAP1Q8N6T3 406 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 OR5P2Q8WZ92 322 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 RBP7Q96R05 134 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 BCL7BQ9BQE9 202 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 POLDIP3Q9BY77 421 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 HEPACAM2A8MVW5 462 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 H7C417 338 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 GM2AP17900 193 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 DEFB103AP81534 67 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 DHCR24Q15392 516 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 ZNF767PQ75MW2 155 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 ERN2Q76MJ5 926 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 LHFPL3Q86UP9 236 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 P2RY13Q9BPV8 354 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 OR2S2Q9NQN1 319 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 PARPBPQ9NWS1 579 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 GRID2O43424 1007 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 GNMTQ14749 295 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 KANK2Q63ZY3 851 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 FIP1L1Q6UN15 594 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 Q6ZVL8 140 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 CHCHD4Q8N4Q1 142 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 SLC15A4Q8N697 577 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 OR13J1Q8NGT2 312 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 KATNBL1Q9H079 304 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 WASH4PA8MWX3 477 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 LRRTM2O43300 516 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 RGS9O75916 674 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 CHMP24386 653 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 UQCRC1P31930 480 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 FRKP42685 505 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 DSC1Q08554 894 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 NIPAL4Q0D2K0 466 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 KCTD18Q6PI47 426 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 BLOC1S3Q6QNY0 202 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 BEST3Q8N1M1 668 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 KRTCAP2Q8N6L1 136 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 OR56A3Q8NH54 315 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 NSUN5Q96P11 429 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 ATG5Q9H1Y0 275 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 GRXCR1A8MXD5 290 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 KHNYNO15037 678 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 PLGP00747 810 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 ALPPL2P10696 532 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 COQ5Q5HYK3 327 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 ALG10BQ5I7T1 473 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 LCN8Q6JVE9 175 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 MTFR2Q6P444 385 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 OR6N1Q8NGY5 312 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 SCGB1C1Q8TD33 95 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 JPH3Q8WXH2 748 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 OR4K3Q96R72 315 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 CDCA3Q99618 268 aaPredicted RBP11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 SLC6A7Q99884 636 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 COPZ2Q9P299 210 aa11.73□□□□□ -0.53
NPLOC4-202ENST00000374747 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 FUOMA2VDF0 154 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 TNFRSF10BO14763 440 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 OXSR1O95747 527 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ARL3P36405 182 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 GAS6Q14393 721 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ABRAXAS2Q15018 415 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 CHRFAM7AQ494W8 412 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ZNF550Q7Z398 422 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 TRMT2BQ96GJ1 504 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 NECAB3Q96P71 396 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 EIF5A2Q9GZV4 153 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 DOCK5Q9H7D0 1870 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 COL4A5P29400 1685 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 HYKKA2RU49 373 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 CENPBD1B2RD01 187 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 SSX5O60225 188 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 BMXP51813 675 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 OR4D2P58180 307 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 MGAT3Q09327 533 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 PMS2P3Q13401 168 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 C12orf40Q86WS4 652 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 OR4K17Q8NGC6 315 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 NECTIN4Q96NY8 510 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 TRIB3Q96RU7 358 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 CMKLR1Q99788 373 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ZNF649Q9BS31 505 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ENY2Q9NPA8 101 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 KLRF1Q9NZS2 232 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 UNC119BA6NIH7 251 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 MUSKO15146 869 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 LDB2O43679 373 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 PLATP00750 562 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ZNF16P17020 682 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 RHCEP18577 417 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ADH6P28332 368 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 SUOXP51687 545 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 POU4F2Q12837 409 aa11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ELAVL3Q14576 367 aaKnown RBP11.72□□□□□ -0.53
NPLOC4-202ENST00000374747 ASRGL1Q7L266 308 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms