RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RPL13AP3Q6NVV1 102 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CDC73Q6P1J9 531 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 TUBA3EQ6PEY2 450 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 KIAA1324Q6UXG2 1013 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 Q6ZSR6 202 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PARGQ86W56 976 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 SFTPA1Q8IWL2 248 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 OR2L13Q8N349 312 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 HORMAD2Q8N7B1 307 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CLDN22Q8N7P3 220 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CDRT4Q8N9R6 151 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 BPIFB6Q8NFQ5 453 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 OR4E2Q8NGC2 313 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 BAHD1Q8TBE0 780 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ADAMTS15Q8TE58 950 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 UTP15Q8TED0 518 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 OR1E3Q8WZA6 343 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 MAL2Q969L2 176 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 EXOSC8Q96B26 276 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF681Q96N22 645 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 SIGLEC11Q96RL6 698 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CCNL2Q96S94 520 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CD180Q99467 661 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ITPAQ9BY32 194 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 NMNAT1Q9HAN9 279 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 FANCEQ9HB96 536 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC6A20Q9NP91 592 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 C14orf105Q9NVL8 296 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 FKBP14Q9NWM8 211 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 NLGN3Q9NZ94 848 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF624Q9P2J8 865 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PSORS1C1Q9UIG5 152 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ENPP5Q9UJA9 477 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PILRAQ9UKJ1 303 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 DAPP1Q9UN19 280 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 SH3GLB1Q9Y371 365 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 RPL36Q9Y3U8 105 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PCDHGA6Q9Y5G7 932 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PCYT1BQ9Y5K3 369 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 MTCH2Q9Y6C9 303 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ATG2AQ2TAZ0 1938 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 A0A1W2PPC4 97 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 A0A1W2PR48 441 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 TCRBV21S2A2A0A5A6 115 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 POM121BA6NF01 834 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 LILRA5A6NI73 299 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 OR52A4PA6NMU1 304 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 WASHC1A8K0Z3 465 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 ST8SIA5O15466 376 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 FAM20BO75063 409 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 COQ9O75208 318 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 AIFM1O95831 613 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CLIC3O95833 236 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 GBAP04062 536 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 HMGN2P05204 90 aaKnown RBP8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 SERPIND1P05546 499 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CDK1P06493 297 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CTSEP14091 401 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 PORP16435 677 aaPredicted RBP8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 GABRG2P18507 467 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CPN2P22792 545 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CD6P30203 668 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 FASLGP48023 281 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 SOX9P48436 509 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 EPHA4P54764 986 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CDH15P55291 814 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CYP4F2P78329 520 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 NFATC3Q12968 1075 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 HSPB3Q12988 150 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 DUSP8Q13202 625 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 TMED1Q13445 227 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 TDGQ13569 410 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 TRAM2Q15035 370 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 EXOC3L2Q2M3D2 409 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 ALG11Q2TAA5 492 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 ARHGAP11BQ3KRB8 267 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 KLHL22Q53GT1 634 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 ENTPD8Q5MY95 495 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 GPR107Q5VW38 600 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 C1orf94Q6P1W5 598 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 FIGLAQ6QHK4 219 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CASP12Q6UXS9 341 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 SLC36A4Q6YBV0 504 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 RRM2BQ7LG56 351 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 ZNF367Q7RTV3 350 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 B3GNT8Q7Z7M8 397 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 P2RY8Q86VZ1 359 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 GKN2Q86XP6 184 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 PEX5LQ8IYB4 626 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 CAMKK1Q8N5S9 505 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 SLC5A8Q8N695 610 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 TMCO5AQ8N6Q1 288 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 MINDY2Q8NBR6 621 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 NUP43Q8NFH3 380 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 RPLP0P6Q8NHW5 317 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 XAGE5Q8WWM1 108 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 KLHDC7BQ96G42 594 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 DACH2Q96NX9 599 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 OR2A14Q96R47 310 aa8.21□□□□□ -1.1
SNRNP40-202ENST00000373720 COPS4Q9BT78 406 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms