RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 FAM120BQ96EK7 910 aaKnown RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SLC47A1Q96FL8 570 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 CMTM7Q96FZ5 175 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SEPHS2Q99611 448 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SPRTNQ9H040 489 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ANKHQ9HCJ1 492 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 DCAF13Q9NV06 445 aaKnown RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 FAIMQ9NVQ4 179 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 FAM118AQ9NWS6 357 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 CHCHD3Q9NX63 227 aaKnown RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF225Q9UK10 706 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ITGB1BP2Q9UKP3 347 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF490Q9ULM2 529 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 PCDHGB4Q9UN71 923 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 PCDHGB7Q9Y5F8 929 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 PCDHGB5Q9Y5G0 923 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 A0A1B0GX78 115 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ASPDHA6ND91 283 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 NCF1BA6NI72 391 aaPredicted RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 NCF1CA8MVU1 366 aaPredicted RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 K7EM74 188 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 M0QX08 132 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 MANBAO00462 879 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 PEX12O00623 359 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 OR7A17O14581 309 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 DSCR3O14972 297 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 MYO1DO94832 1006 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ITGAMP11215 1152 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 HSD3B1P14060 373 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 NCF1P14598 390 aaPredicted RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 HRH2P25021 359 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 HSD3B2P26439 372 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 IL12AP29459 219 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 CD97P48960 835 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 AGTR2P50052 363 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 OR4D2P58180 307 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ABATP80404 500 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 IL10RAQ13651 578 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 SSPNQ14714 243 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 RAB39AQ14964 217 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 KIAA0040Q15053 153 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 NKAIN1Q4KMZ8 207 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 C1orf189Q5VU69 101 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 LETMD1Q6P1Q0 360 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 SLC2A7Q6PXP3 512 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 SBSNQ6UWP8 590 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 Q6ZNX1 250 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 RNF44Q7L0R7 432 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 FAM20CQ8IXL6 584 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 OR2A1Q8NGT9 310 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 MCOLN3Q8TDD5 553 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ADAMTS17Q8TE56 1095 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ATL1Q8WXF7 558 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 TMIGD2Q96BF3 282 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 RHBDF1Q96CC6 855 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 PYURFQ96I23 114 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 REXO5Q96IC2 774 aaKnown RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 COX4I2Q96KJ9 171 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 FER1L6-AS2Q96M78 137 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 OR52E6Q96RD3 313 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 APOL4Q9BPW4 351 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ZFYVE21Q9BQ24 234 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ACTR8Q9H981 624 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 MRPS30Q9NP92 439 aaKnown RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 ENAMQ9NRM1 1142 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 DHCR7Q9UBM7 475 aaKnown RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 NXT1Q9UKK6 140 aaKnown RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 PDE10AQ9Y233 779 aa9.79□□□□□ -0.84
COL5A1-202ENST00000371820 PCDHGA9Q9Y5G4 932 aaKnown RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 USP9YO00507 2555 aaPredicted RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 USP9XQ93008 2570 aaPredicted RBP9.79□□□□□ -0.84
COL5A1-202ENST00000371820 A0A0J9YVX5 310 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 LOC100130705A0A1B0GUX0 176 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 A0A1W2PPV9 198 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ARGFXA6NJG6 315 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 H3BMQ9 156 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 GFYI3L273 518 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PLOD2O00469 737 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 KPNA4O00629 521 aaPredicted RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 SNAP29O95721 258 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PRPS1L1P21108 318 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ALAS2P22557 587 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 CRHBPP24387 322 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PSMB5P28074 263 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PCSK6P29122 969 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 RANBP1P43487 201 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PGDP52209 483 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 EMP3P54852 163 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 RELAQ04206 551 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 TRAF3Q13114 568 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 PMS2P3Q13401 168 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 TSTA3Q13630 321 aaPredicted RBP9.78□□□□□ -0.84
COL5A1-202ENST00000371820 KEAP1Q14145 624 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF846Q147U1 533 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 ABRAXAS2Q15018 415 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 CCSMST1Q4G0I0 132 aa9.78□□□□□ -0.84
COL5A1-202ENST00000371820 RFTN2Q52LD8 501 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms