RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CPEB1Q9BZB8 566 aaKnown RBP18.72■□□□□ 0.59
LMO4-202ENST00000370544 SLC6A15Q9H2J7 730 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 C12orf4Q9NQ89 552 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 MTMR10Q9NXD2 777 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 PCDHGA7Q9Y5G6 932 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 SDC3O75056 442 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 CAPN3P20807 821 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 GLP1RP43220 463 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 ARHGAP11AQ6P4F7 1023 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 LHFPL3Q86UP9 236 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 SAMD12Q8N8I0 201 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 SLC22A8Q8TCC7 542 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 GDE1Q9NZC3 331 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 ANKMY1Q9P2S6 941 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 PRKCAP17252 672 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 GRIN2CQ14957 1233 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 TCTE1Q5JU00 501 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 CARD17Q5XLA6 110 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 TRMT2BQ96GJ1 504 aaKnown RBP18.72■□□□□ 0.59
LMO4-202ENST00000370544 FRMD6Q96NE9 622 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 ACTRT3Q9BYD9 372 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 TREX1Q9NSU2 369 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 PADI2Q9Y2J8 665 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 FXYD6-FXYD2A0A087WZ82 144 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 CST5P28325 142 aaPredicted RBP18.72■□□□□ 0.59
LMO4-202ENST00000370544 PLP2Q04941 152 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 RGNQ15493 299 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 ACVR1CQ8NER5 493 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 FXYD6Q9H0Q3 95 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 NOP16Q9Y3C1 178 aaKnown RBP18.72■□□□□ 0.59
LMO4-202ENST00000370544 USP3Q9Y6I4 520 aa18.72■□□□□ 0.59
LMO4-202ENST00000370544 GXYLT2A0PJZ3 443 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 FOXA1P55317 472 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 MPP7Q5T2T1 576 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 PDZD3Q86UT5 571 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 ZSCAN4Q8NAM6 433 aaPredicted RBP18.71■□□□□ 0.59
LMO4-202ENST00000370544 LRR1Q96L50 414 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 OR1F2PQ96R84 312 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 CLSTN3Q9BQT9 956 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 EXTL2Q9UBQ6 330 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 SLC22A31A6NKX4 558 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 S100A10P60903 97 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 DNASE1L3Q13609 305 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 HNRNPA1L2Q32P51 320 aaKnown RBP18.71■□□□□ 0.59
LMO4-202ENST00000370544 SYCE2Q6PIF2 218 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 CHRDL2Q6WN34 429 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 TRIM73Q86UV7 250 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 THAP6Q8TBB0 222 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 SERINC2Q96SA4 455 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 APOOQ9BUR5 198 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 SRA1Q9HD15 236 aaKnown RBP18.71■□□□□ 0.59
LMO4-202ENST00000370544 TIGARQ9NQ88 270 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 SDR39U1Q9NRG7 319 aaPredicted RBP18.71■□□□□ 0.59
LMO4-202ENST00000370544 DRD1P21728 446 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 DEFB110Q30KQ9 67 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 LCTLQ6UWM7 567 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 PIANPQ8IYJ0 282 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 NETO1Q8TDF5 533 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 RDH14Q9HBH5 336 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 SMOXQ9NWM0 555 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 C5AR2Q9P296 337 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 B4GALT7Q9UBV7 327 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 KLHL21Q9UJP4 597 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 CNOT11Q9UKZ1 510 aaKnown RBP18.71■□□□□ 0.59
LMO4-202ENST00000370544 GPR37L1O60883 481 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 YES1P07947 543 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 ETV4P43268 484 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 ZNF45Q02386 682 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 CEACAM19Q7Z692 300 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 TOR1AIP2Q8NFQ8 470 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 GATAD2BQ8WXI9 593 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 HHATLQ9HCP6 504 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 HSPE1-MOB4S4R3N1 261 aa18.71■□□□□ 0.59
LMO4-202ENST00000370544 TEX13CA0A0J9YWL9 993 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 TEX13DA0A0J9YY54 714 aaPredicted RBP18.71■□□□□ 0.58
LMO4-202ENST00000370544 STSP08842 583 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 DCKP27707 260 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 AFF1P51825 1210 aaKnown RBP18.71■□□□□ 0.58
LMO4-202ENST00000370544 CAPZA1P52907 286 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 RIN1Q13671 783 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 FAM180BQ6P0A1 224 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 ZBTB20Q9HC78 741 aaPredicted RBP18.71■□□□□ 0.58
LMO4-202ENST00000370544 DHDHQ9UQ10 334 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 TMEM14AQ9Y6G1 99 aa18.71■□□□□ 0.58
LMO4-202ENST00000370544 SMAD9O15198 467 aaKnown RBP18.7■□□□□ 0.58
LMO4-202ENST00000370544 GABARAPL2P60520 117 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 MAB21L1Q13394 359 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 COL9A2Q14055 689 aaPredicted RBP18.7■□□□□ 0.58
LMO4-202ENST00000370544 GTDC1Q4AE62 458 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 GXYLT1Q4G148 440 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 FOXRED2Q8IWF2 684 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 OR7G3Q8NG95 312 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 RPLP0P6Q8NHW5 317 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 FEVQ99581 238 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 RXFP3Q9NSD7 469 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 SCP2D1Q9UJQ7 156 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 RPS17P08708 135 aaKnown RBP18.7■□□□□ 0.58
LMO4-202ENST00000370544 FAM69BQ5VUD6 431 aa18.7■□□□□ 0.58
LMO4-202ENST00000370544 FAM46AQ96IP4 442 aaKnown RBP18.7■□□□□ 0.58
LMO4-202ENST00000370544 SLC46A2Q9BY10 475 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms