RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PGRP06401 933 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 FAM87AP0C7U9 286 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 S1PR1P21453 382 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 SOX18P35713 384 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
TPM3-211ENST00000368531 ATP4BP51164 291 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 PRKAG1P54619 331 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 AP2B1P63010 937 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 FUT7Q11130 342 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
TPM3-211ENST00000368531 MYBPC3Q14896 1274 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 LINC00303Q3SY05 128 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 METTL21CQ5VZV1 264 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 HSDL2Q6YN16 418 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 C16orf47Q6ZP98 133 aaPredicted RBP12.92□□□□□ -0.34
TPM3-211ENST00000368531 LINC00696Q6ZRV3 163 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 CAMKMTQ7Z624 323 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 NATD1Q8N6N6 113 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 GLB1L3Q8NCI6 653 aaPredicted RBP12.92□□□□□ -0.34
TPM3-211ENST00000368531 OR52R1Q8NGF1 315 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 OR8J2Q8NGG1 315 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 ZNF675Q8TD23 568 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 OR5P2Q8WZ92 322 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 PSMF1Q92530 271 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 CTHRC1Q96CG8 243 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 ELP4Q96EB1 424 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 GAL3ST4Q96RP7 486 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 CCT8L2Q96SF2 557 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 SLC25A23Q9BV35 468 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 OR10A5Q9H207 317 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 CDCP1Q9H5V8 836 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 ACSS1Q9NUB1 689 aaPredicted RBP12.92□□□□□ -0.34
TPM3-211ENST00000368531 PCDHGB4Q9UN71 923 aa12.92□□□□□ -0.34
TPM3-211ENST00000368531 PPIEQ9UNP9 301 aaKnown RBP12.92□□□□□ -0.34
TPM3-211ENST00000368531 MAP1BP46821 2468 aaKnown RBP12.91□□□□□ -0.34
TPM3-211ENST00000368531 WWP2O00308 870 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 MAN1A2O60476 641 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 CBX7O95931 251 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 CLPSP04118 112 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 SOAT1P35610 550 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 ZFP36L2P47974 494 aaKnown RBP12.91□□□□□ -0.34
TPM3-211ENST00000368531 SLC37A1P57057 533 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 KCNK10P57789 538 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 RNF4P78317 190 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 DUSP8Q13202 625 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 DPY19L1Q2PZI1 675 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 TIGD2Q4W5G0 525 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 ANXA8L1Q5VT79 327 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 GK5Q6ZS86 529 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 SLC29A4Q7RTT9 530 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 FUNDC1Q8IVP5 155 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 CLEC4FQ8N1N0 589 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 VPS37AQ8NEZ2 397 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 OR7G1Q8NGA0 311 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 OR4A15Q8NGL6 344 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 VPS33AQ96AX1 596 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 INPP5KQ9BT40 448 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 SEMA4CQ9C0C4 833 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 ZNF385DQ9H6B1 395 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 ZNF552Q9H707 407 aaPredicted RBP12.91□□□□□ -0.34
TPM3-211ENST00000368531 SAR1AQ9NR31 198 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 DDX18Q9NVP1 670 aaKnown RBP12.91□□□□□ -0.34
TPM3-211ENST00000368531 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.91□□□□□ -0.34
TPM3-211ENST00000368531 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 PTPRQQ9UMZ3 2332 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 CHD8Q9HCK8 2581 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 CPAMD8Q8IZJ3 1885 aa12.91□□□□□ -0.34
TPM3-211ENST00000368531 ASPMQ8IZT6 3477 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 CCDC154A6NI56 674 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 MKRN2OSH3BPM6 223 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 RNASET2O00584 256 aaKnown RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 FCHO1O14526 889 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 SHOX2O60902 331 aaPredicted RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 F10P00742 488 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 IL6P05231 212 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 MRPL19P49406 292 aaKnown RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 SOX8P57073 446 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 HBA1P69905 142 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 RHDQ02161 417 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 SPDYE7PQ495Y7 208 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 VPS26BQ4G0F5 336 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 FHL5Q5TD97 284 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 ABHD17BQ5VST6 288 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 AGAP7PQ5VUJ5 663 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 HLA-DQA1Q5Y7H0 255 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 TCTN3Q6NUS6 607 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 JMJD6Q6NYC1 403 aaPredicted RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 WDR53Q7Z5U6 358 aaPredicted RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 PIGWQ7Z7B1 504 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 RPS19BP1Q86WX3 136 aaKnown RBP12.9□□□□□ -0.34
TPM3-211ENST00000368531 C9orf40Q8IXQ3 194 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 SLC5A8Q8N695 610 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 ZNF615Q8N8J6 731 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 OR5AK3PQ8NH89 298 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 C16orf52Q8NHV5 167 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 TTC9Q92623 222 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 SPDL1Q96EA4 605 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 AGAP4Q96P64 663 aa12.9□□□□□ -0.34
TPM3-211ENST00000368531 NMUR2Q9GZQ4 415 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms