RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ZNF180Q9UJW8 692 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 PSME2Q9UL46 239 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 SNX6Q9UNH7 406 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 NPFFR2Q9Y5X5 522 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 ARHGAP21Q5T5U3 1957 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 TACC2O95359 2948 aa13.63□□□□□ -0.23
CTSD-202ENST00000367196 NINQ8N4C6 2090 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 C15orf38-AP3S2A0A0A6YYH1 394 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 A0A0G2JNJ9 132 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 URI1O94763 535 aaPredicted RBP13.62□□□□□ -0.23
CTSD-202ENST00000367196 ZWINTO95229 277 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 GBAP04062 536 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 CLPSP04118 112 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 PORP16435 677 aaPredicted RBP13.62□□□□□ -0.23
CTSD-202ENST00000367196 ENDOUP21128 410 aaKnown RBP13.62□□□□□ -0.23
CTSD-202ENST00000367196 NT5EP21589 574 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 SSTR4P31391 388 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 GCKP35557 465 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 XKP51811 444 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 RIPPLY3P57055 190 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 KRTAP10-9P60411 292 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 TRAF3Q13114 568 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 LGSNQ5TDP6 509 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 RTL6Q6ICC9 239 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 WDR53Q7Z5U6 358 aaPredicted RBP13.62□□□□□ -0.23
CTSD-202ENST00000367196 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 PLD6Q8N2A8 252 aaKnown RBP13.62□□□□□ -0.23
CTSD-202ENST00000367196 METTL4Q8N3J2 472 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 DTNBP1Q96EV8 351 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 FAIM2Q9BWQ8 316 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 BRF2Q9HAW0 419 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 TEX10Q9NXF1 929 aaPredicted RBP13.62□□□□□ -0.23
CTSD-202ENST00000367196 SPRR3Q9UBC9 169 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 Q9UFV3 132 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 SLC12A4Q9UP95 1085 aa13.62□□□□□ -0.23
CTSD-202ENST00000367196 A0A087WUV0 522 aaPredicted RBP13.61□□□□□ -0.23
CTSD-202ENST00000367196 AHRRA9YTQ3 701 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 DVL2O14641 736 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 PGRMC2O15173 223 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 TRIM3O75382 744 aaPredicted RBP13.61□□□□□ -0.23
CTSD-202ENST00000367196 RPS17P08708 135 aaKnown RBP13.61□□□□□ -0.23
CTSD-202ENST00000367196 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 CD1EP15812 388 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 DUSP8Q13202 625 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 SPNS3Q6ZMD2 512 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 LACC1Q8IV20 430 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 VWA5B2Q8N398 1253 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 ZNF615Q8N8J6 731 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 OR4F6Q8NGB9 312 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 SPPL2AQ8TCT8 520 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 DOK4Q8TEW6 326 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 SELENOMQ8WWX9 145 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 HSPBAP1Q96EW2 488 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 RILPQ96NA2 401 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
CTSD-202ENST00000367196 SLC6A15Q9H2J7 730 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 PROK2Q9HC23 129 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 ZNF358Q9NW07 568 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 TRPS1Q9UHF7 1281 aa13.61□□□□□ -0.23
CTSD-202ENST00000367196 ANKHD1Q8IWZ3 2542 aaKnown RBP13.61□□□□□ -0.23
CTSD-202ENST00000367196 EXPH5Q8NEV8 1989 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 WASHC1A8K0Z3 465 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 ACOX3O15254 700 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 TRAPPC6AO75865 159 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 ATP1B1P05026 303 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 NAGAP17050 411 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 CSNK2A2P19784 350 aaPredicted RBP13.6□□□□□ -0.23
CTSD-202ENST00000367196 TAC1P20366 129 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 ABCD3P28288 659 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 FBXW4P57775 412 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 TRA2BP62995 288 aaKnown RBP13.6□□□□□ -0.23
CTSD-202ENST00000367196 GLE1Q53GS7 698 aaKnown RBP13.6□□□□□ -0.23
CTSD-202ENST00000367196 SLC48A1Q6P1K1 146 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 COMMD6Q7Z4G1 85 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 LCA5Q86VQ0 697 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 MMGT1Q8N4V1 131 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 IFT81Q8WYA0 676 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 ADIPOR1Q96A54 375 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 KLHL29Q96CT2 875 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 TMEM41AQ96HV5 264 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
CTSD-202ENST00000367196 NSUN5Q96P11 429 aaKnown RBP13.6□□□□□ -0.23
CTSD-202ENST00000367196 C1QTNF3Q9BXJ4 246 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 ANGPTL4Q9BY76 406 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 BRINP2Q9C0B6 783 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 METTL7AQ9H8H3 244 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 ZBTB26Q9HCK0 441 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 FOXD3Q9UJU5 478 aaPredicted RBP13.6□□□□□ -0.23
CTSD-202ENST00000367196 NFU1Q9UMS0 254 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 EDARQ9UNE0 448 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 STK38LQ9Y2H1 464 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 C15orf41Q9Y2V0 281 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 PCDHA9Q9Y5H5 950 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 ZNF780BQ9Y6R6 833 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 C2CD3Q4AC94 2353 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 NCKAP5O14513 1909 aa13.6□□□□□ -0.23
CTSD-202ENST00000367196 SPG11Q96JI7 2443 aa13.59□□□□□ -0.23
CTSD-202ENST00000367196 EXOC1LA0A1B0GW35 172 aa13.59□□□□□ -0.23
CTSD-202ENST00000367196 TRIM49D1C9J1S8 452 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms