RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 C3orf49Q96BT1 292 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 CENPOQ9BU64 300 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 LGR4Q9BXB1 951 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 OR2AG1Q9H205 316 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 EPHX3Q9H6B9 360 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 SOX17Q9H6I2 414 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 PAPPA2Q9BXP8 1791 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ZNF705FA8MVS1 300 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 MEN1O00255 615 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 SMAD9O15198 467 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 TGM6O95932 706 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 SLC35G6P0C7Q6 338 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ZNF705DP0CH99 300 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ZNF705BP0CI00 300 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 DNASE1L1P49184 302 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 HK3P52790 923 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 TRA2BP62995 288 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 VAMP2P63027 116 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 PRKCDQ05655 676 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 HSPB3Q12988 150 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 GFOD2Q3B7J2 385 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 TBC1D25Q3MII6 688 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 TMEM35AQ53FP2 167 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 RTN4RL1Q86UN2 441 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 OR5H6Q8NGV6 325 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 HUS1BQ8NHY5 278 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 SETD6Q8TBK2 473 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 SAMD11Q96NU1 681 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 OR2M4Q96R27 311 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 TMED9Q9BVK6 235 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 GABARAPL1Q9H0R8 117 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 BEX1Q9HBH7 125 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 TCF7L1Q9HCS4 588 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ZCCHC3Q9NUD5 404 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 MGAT4CQ9UBM8 478 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 LIPT1Q9Y234 373 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ACTL7AQ9Y615 435 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 SCN2AQ99250 2005 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ANKRD33BA6NCL7 494 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 NPIPB15A6NHN6 443 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 NUPL2O15504 423 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 IFNA2P01563 188 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 HK1P19367 917 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 CPN2P22792 545 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 NRIP1P48552 1158 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 DBPQ10586 325 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 COL28A1Q2UY09 1125 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 CRB2Q5IJ48 1285 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 FOXRED2Q8IWF2 684 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 SIMC1Q8NDZ2 872 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ABHD11Q8NFV4 315 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 OR5T3Q8NGG3 340 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 MTG2Q9H4K7 406 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 MRPS30Q9NP92 439 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 IMP3Q9NV31 184 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 ERVK13-1Q9NX77 482 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 RNF186Q9NXI6 227 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 TVP23BQ9NYZ1 205 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 HS3ST2Q9Y278 367 aa5.12□□□□□ -1.59
CDC42BPA-204ENST00000366767 I6L893 689 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 FZD6O60353 706 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 LDOC1O95751 146 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 CD53P19397 219 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 MAP2K4P45985 399 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 SNTA1Q13424 505 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 MTFR2Q6P444 385 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 SLC36A4Q6YBV0 504 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 ZNF627Q7L945 461 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 JAZF1Q86VZ6 243 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 RIMKLAQ8IXN7 391 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 C7orf57Q8NEG2 295 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 AUTS2Q8WXX7 1259 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 TRIM2Q9C040 744 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 ARL6Q9H0F7 186 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 MYNNQ9NPC7 610 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 GNG8Q9UK08 70 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 GPR34Q9UPC5 381 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 MRPS33Q9Y291 106 aaKnown RBP5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 PRSS21Q9Y6M0 314 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 C13orf42A0A1B0GVH6 325 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 SULT1C2O00338 296 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 TSPAN6O43657 245 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 PAHP00439 452 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 OSMP13725 252 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 GPX2P18283 190 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 FUT4P22083 530 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 CD6P30203 668 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 NRG3P56975 720 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 TRAM1Q15629 374 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 TBCEQ15813 527 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 C18orf21Q32NC0 220 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 C16orf78Q8WTQ4 265 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 TMEM203Q969S6 136 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 ZNF300Q96RE9 604 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 CLSTN3Q9BQT9 956 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 SIAEQ9HAT2 523 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 C14orf105Q9NVL8 296 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 NLGN3Q9NZ94 848 aa5.11□□□□□ -1.59
CDC42BPA-204ENST00000366767 DLGAP4Q9Y2H0 992 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms