RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 KIAA1328Q86T90 577 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 GLCCI1Q86VQ1 547 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 CCDC28AQ8IWP9 274 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 MCEMP1Q8IX19 187 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 SLC34A3Q8N130 599 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 OTUD6BQ8N6M0 293 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 UBL4BQ8N7F7 174 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 NANOGP1Q8N7R0 232 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 BCORP1Q8N888 145 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 LRRC57Q8N9N7 239 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR2L3Q8NG85 312 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 GSDMBQ8TAX9 411 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 RAD51AP1Q96B01 352 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 COQ8BQ96D53 544 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 CABS1Q96KC9 395 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 C10orf90Q96M02 699 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF48Q96MX3 618 aaPredicted RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF285Q96NJ3 590 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 TAAR6Q96RI8 345 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ACAT2Q9BWD1 397 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 CARD6Q9BX69 1037 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 TSSK1BQ9BXA7 367 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ARL8BQ9NVJ2 186 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ELOVL5Q9NYP7 299 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 IL1RAPL1Q9NZN1 696 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 COPG2Q9UBF2 871 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 TRPC4Q9UBN4 977 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF282Q9UDV7 671 aaPredicted RBP4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 SH3BGRL2Q9UJC5 107 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 ANAPC5Q9UJX4 755 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 FAM169AQ9Y6X4 670 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 HEATR5BQ9P2D3 2071 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 CENPEQ02224 2701 aa4.88□□□□□ -1.63
RNU4-4P-201ENST00000364588 SCN3AQ9NY46 2000 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 TRAV17A0A0B4J275 112 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 TRGV8A0A0C4DH27 118 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 A0A1W2PPV9 198 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ERI2A8K979 691 aaKnown RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 BTNL10A8MVZ5 291 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 IDSB3KWA1 339 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 H0YGG7 62 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 CCL21O00585 134 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRMT5O14744 637 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PCDH17O14917 1159 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 SRPX2O60687 465 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 NDUFS3O75489 264 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 STATHP02808 62 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 APRTP07741 180 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZSCAN5DPP0CG00 497 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ERVK-10P10266 1014 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 COX6A1P12074 109 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 CXCR2P25025 360 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 NMBRP28336 390 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 CMPK1P30085 196 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 GALNSP34059 522 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 THBS4P35443 961 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PPARGP37231 505 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 FDFT1P37268 417 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 TNFSF10P50591 281 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 TDGF1P3P51864 188 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 EMP2P54851 167 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 EIF3BP55884 814 aaKnown RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ARF3P61204 181 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 RAE1P78406 368 aaKnown RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PMP22Q01453 160 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ACVR1Q04771 509 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 SNX1Q13596 522 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 KPNB1Q14974 876 aaKnown RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 SYT16Q17RD7 645 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 KCTD19Q17RG1 926 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 HKDC1Q2TB90 917 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRTGQ2VWP7 1150 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ATG9BQ674R7 924 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZNF324BQ6AW86 544 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 GRHL2Q6ISB3 625 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 RPUSD3Q6P087 351 aaKnown RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PRMT9Q6P2P2 845 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 SUSD1Q6UWL2 747 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 NDUFAF7Q7L592 441 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 OTOAQ7RTW8 1153 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 RAB42Q8N4Z0 105 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 OR2A1Q8NGT9 310 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 C16orf52Q8NHV5 167 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 C1orf54Q8WWF1 131 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ITLN2Q8WWU7 325 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PSMF1Q92530 271 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 NR4A3Q92570 626 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 ZUFSPQ96AP4 578 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 MOCOSQ96EN8 888 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 MMABQ96EY8 250 aaPredicted RBP4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PANX3Q96QZ0 392 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 PANX2Q96RD6 677 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 DPH7Q9BTV6 452 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 RAB11FIP5Q9BXF6 653 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 NUAK2Q9H093 628 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 P2RY12Q9H244 342 aa4.87□□□□□ -1.63
RNU4-4P-201ENST00000364588 CHRAC1Q9NRG0 131 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms