RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ZNF155Q12901 538 aaPredicted RBP10.59□□□□□ -0.71
SSU72-202ENST00000359060 SUZ12Q15022 739 aaKnown RBP10.59□□□□□ -0.71
SSU72-202ENST00000359060 GPR19Q15760 415 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 TRIQKQ629K1 86 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 BCDIN3DQ7Z5W3 292 aaKnown RBP10.59□□□□□ -0.71
SSU72-202ENST00000359060 ZNF761Q86XN6 746 aaPredicted RBP10.59□□□□□ -0.71
SSU72-202ENST00000359060 RHOXF1Q8NHV9 184 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 SLC22A18Q96BI1 424 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 C16orf58Q96GQ5 468 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 CSF3RQ99062 836 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 RBCK1Q9BYM8 510 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 TMEM38AQ9H6F2 299 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 PALMDQ9NP74 551 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 ACER3Q9NUN7 267 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 THAP10Q9P2Z0 257 aaPredicted RBP10.59□□□□□ -0.71
SSU72-202ENST00000359060 NFKBIL1Q9UBC1 381 aaPredicted RBP10.59□□□□□ -0.71
SSU72-202ENST00000359060 PSORS1C1Q9UIG5 152 aa10.59□□□□□ -0.71
SSU72-202ENST00000359060 DUXAA6NLW8 204 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 SLC30A4O14863 429 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 CLEC3AO75596 197 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 IGFBP1P08833 259 aaPredicted RBP10.58□□□□□ -0.71
SSU72-202ENST00000359060 HTR1AP08908 422 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 HIST1H1TP22492 207 aaPredicted RBP10.58□□□□□ -0.71
SSU72-202ENST00000359060 SOX3P41225 446 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 RAB15P59190 212 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 TMEM35AQ53FP2 167 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 SLC35F1Q5T1Q4 408 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 MLIPQ5VWP3 458 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 C18orf63Q68DL7 685 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 ADAMTSL4Q6UY14 1074 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 PHOSPHO2Q8TCD6 241 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 GLIPR2Q9H4G4 154 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 TBCCD1Q9NVR7 557 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 CNIH4Q9P003 139 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 WDR37Q9Y2I8 494 aa10.58□□□□□ -0.71
SSU72-202ENST00000359060 THSD7BQ9C0I4 1608 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.58□□□□□ -0.72
SSU72-202ENST00000359060 EMC8O43402 210 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 CDRT1O95170 752 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 NDUFS1P28331 727 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 IDUAP35475 653 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ST3GAL3Q11203 375 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 SYT6Q5T7P8 510 aaPredicted RBP10.58□□□□□ -0.72
SSU72-202ENST00000359060 NIPAL1Q6NVV3 410 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 LHFPL3Q86UP9 236 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 CADM2Q8N3J6 435 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ZFP41Q8N8Y5 198 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ANKRD53Q8N9V6 530 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 FBXO15Q8NCQ5 510 aaPredicted RBP10.58□□□□□ -0.72
SSU72-202ENST00000359060 BBS10Q8TAM1 723 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ZNF354BQ96LW1 612 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 KLHL31Q9H511 634 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 C14orf119Q9NWQ9 140 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 SOHLH2Q9NX45 425 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ZSCAN32Q9NX65 697 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 WBP11Q9Y2W2 641 aaKnown RBP10.58□□□□□ -0.72
SSU72-202ENST00000359060 IFT52Q9Y366 437 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 GMEB1Q9Y692 573 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 PCM1Q15154 2024 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 TSPAN11A1L157 253 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 OR6C74A6NCV1 312 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 PGRMC2O15173 223 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 EFEMP2O95967 443 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ZNHIT3Q15649 155 aaPredicted RBP10.58□□□□□ -0.72
SSU72-202ENST00000359060 PRSS36Q5K4E3 855 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ZNF367Q7RTV3 350 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 NEURL3Q96EH8 262 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 OR5M11Q96RB7 305 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 BTBD1Q9H0C5 482 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 TMEM184CQ9NVA4 438 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 PLXNA3P51805 1871 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 CXorf51AA0A1B0GTR3 108 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 HAT1O14929 419 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ATP6V1G1O75348 118 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ADORA3P0DMS8 318 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 GPR4P46093 362 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 STX4Q12846 297 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 C1orf61Q13536 156 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 TBCEQ15813 527 aaPredicted RBP10.58□□□□□ -0.72
SSU72-202ENST00000359060 KLHL22Q53GT1 634 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 C6orf132Q5T0Z8 1188 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 FAM109BQ6ICB4 259 aaPredicted RBP10.58□□□□□ -0.72
SSU72-202ENST00000359060 PODNL1Q6PEZ8 512 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ASPGQ86U10 573 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 NRROSQ86YC3 692 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 SUN3Q8TAQ9 357 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 RNFT2Q96EX2 444 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 MND1Q9BWT6 205 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 HDAC8Q9BY41 377 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 GABARAPL1Q9H0R8 117 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 NKX2-4Q9H2Z4 354 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 RNF167Q9H6Y7 350 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 COMMD3Q9UBI1 195 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 SERGEFQ9UGK8 458 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 ATG4BQ9Y4P1 393 aa10.58□□□□□ -0.72
SSU72-202ENST00000359060 SCN3AQ9NY46 2000 aa10.57□□□□□ -0.72
SSU72-202ENST00000359060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.57□□□□□ -0.72
SSU72-202ENST00000359060 BMP4P12644 408 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms