RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CTRCQ99895 268 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 KLK14Q9P0G3 267 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 OARD1Q9Y530 152 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NDUFB5O43674 189 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CD1DP15813 335 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 UGT2B7P16662 529 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ELK1P19419 428 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 IL12BP29460 328 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CHRFAM7AQ494W8 412 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NOXRED1Q6NXP6 359 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PRSS55Q6UWB4 352 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 IFNL1Q8IU54 200 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CBARPQ8N350 705 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 OR52E4Q8NGH9 312 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 BRIX1Q8TDN6 353 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 LCN9Q8WX39 176 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZDHHC12Q96GR4 267 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 YIPF2Q9BWQ6 316 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 OLAHQ9NV23 265 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 TOGARAM1Q9Y4F4 1720 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NCOA6Q14686 2063 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 YKT6O15498 198 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CCKBRP32239 447 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 KIAA0319LQ8IZA0 1049 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 MARCH10Q8NA82 808 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RAB7BQ96AH8 199 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC39A13Q96H72 371 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NDRG3Q9UGV2 375 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 POLR2AP24928 1970 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 A0A1W2PQL4 384 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 D6RAR5 112 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PRKCGP05129 697 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF286BP0CG31 522 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 HOXA9P31269 272 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 HBG1P69891 147 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 HBG2P69892 147 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 DSC2Q02487 901 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 INAVAQ3KP66 663 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PXDC1Q5TGL8 231 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 BORCS6Q96GS4 357 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF578Q96N58 590 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 MED18Q9BUE0 208 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 KCNK13Q9HB14 408 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PTPRHQ9HD43 1115 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 MRPS30Q9NP92 439 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ISYNA1Q9NPH2 558 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 WASH6PQ9NQA3 447 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 DHDHQ9UQ10 334 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 F8W036 122 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 IRF6O14896 467 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 IVDP26440 423 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PRAMEF14Q5SWL7 426 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 TFAP2BQ92481 460 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RSC1A1Q92681 617 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RAB3BP20337 219 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 FNDC3BQ53EP0 1204 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 UBAP2Q5T6F2 1119 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SSX6Q7RTT6 188 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 B3GNT4Q9C0J1 378 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF304Q9HCX3 659 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 DDTLA6NHG4 134 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 H7C1Q1 480 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ARVCFO00192 962 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 IRF1P10914 325 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ITPKAP23677 461 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 TAS2R20P59543 309 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 TECRLQ5HYJ1 363 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF627Q7L945 461 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ADGRG5Q8IZF4 528 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 JOSD2Q8TAC2 188 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CD300LFQ8TDQ1 290 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 WNT10BO00744 389 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CREB1P16220 341 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NDUFV2P19404 249 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PYCR1P32322 319 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 KDELR2P33947 212 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SPCS2Q15005 226 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 GGTA1PQ4G0N0 100 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CPZQ66K79 652 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NKAIN3Q8N8D7 197 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC19A3Q9BZV2 496 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC25A31Q9H0C2 315 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ELP3Q9H9T3 547 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 VAPAQ9P0L0 249 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PCDHGA7Q9Y5G6 932 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PHF3Q92576 2039 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 A8MXE2 369 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SDC3O75056 442 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 GLUD1P00367 558 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 AKAIN1P0CW23 69 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TAS2R30P59541 319 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 MXD1Q05195 221 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 AKIRIN2Q53H80 203 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM200AQ86VY9 491 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 A0A1W2PS29 197 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 MSX2P35548 267 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PPP2R2DQ66LE6 453 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms