RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 SPIBQ01892 262 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 RHAGQ02094 409 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 RPA4Q13156 261 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 RFX4Q33E94 735 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 ZC3H12BQ5HYM0 836 aaKnown RBP12.72□□□□□ -0.37
COPS7B-201ENST00000350033 UBE3DQ7Z6J8 389 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 OXR1Q8N573 874 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 SLC5A8Q8N695 610 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 RAB8BQ92930 207 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 TBC1D20Q96BZ9 403 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 YIPF6Q96EC8 236 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 FEVQ99581 238 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 AIF1LQ9BQI0 150 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 SERHL2Q9H4I8 314 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 KLHL31Q9H511 634 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 ZNF556Q9HAH1 456 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 CA5BQ9Y2D0 317 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 PCDHGB1Q9Y5G3 927 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 SCN3AQ9NY46 2000 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 BRWD1Q9NSI6 2320 aa12.72□□□□□ -0.37
COPS7B-201ENST00000350033 FAM227AF5H4B4 570 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 SLC31A1O15431 190 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 GTF2E2P29084 291 aaKnown RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 CD6P30203 668 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 LSM3P62310 102 aaKnown RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 NPRL3Q12980 569 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 EXOC3L2Q2M3D2 409 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 FAHD1Q6P587 224 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 HMGN2P46Q86SG4 172 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 HORMAD2Q8N7B1 307 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 OR9Q2Q8NGE9 314 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 ZFAND1Q8TCF1 268 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 FBLIM1Q8WUP2 373 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 UBE2E3Q969T4 207 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 NIPSNAP1Q9BPW8 284 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 MIR1-1HGQ9H1L0 117 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 SYNPO2LQ9H987 977 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 PRDM8Q9NQV8 689 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 NDRG4Q9ULP0 352 aaKnown RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 MDC1Q14676 2089 aaKnown RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 A8MV72 311 aaPredicted RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 C4orf51C9J302 202 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 PCDHGA12O60330 932 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 SNX4O95219 450 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 PDGFAP04085 211 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 PSKH1P11801 424 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 MANFP55145 182 aaKnown RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 GPR50Q13585 617 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 TEAD4Q15561 434 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 ZNF404Q494X3 552 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 TMEM31Q5JXX7 168 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 XKRXQ6PP77 449 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 LSRQ86X29 649 aaPredicted RBP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 FAR1Q8WVX9 515 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 SMPDL3AQ92484 453 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 SPATA9Q9BWV2 254 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 AMBNQ9NP70 447 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 OBP2AQ9NY56 170 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 GLTPQ9NZD2 209 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.71□□□□□ -0.37
COPS7B-201ENST00000350033 SLC6A14Q9UN76 642 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 MAPRE3Q9UPY8 281 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 PADI2Q9Y2J8 665 aa12.71□□□□□ -0.37
COPS7B-201ENST00000350033 SPEGQ15772 3267 aa12.71□□□□□ -0.38
COPS7B-201ENST00000350033 TICRRQ7Z2Z1 1910 aa12.71□□□□□ -0.38
COPS7B-201ENST00000350033 PCDH17O14917 1159 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 CPNE3O75131 537 aaKnown RBP12.7□□□□□ -0.38
COPS7B-201ENST00000350033 SCO1O75880 301 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 RECKO95980 971 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 CEACAM5P06731 702 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 ALPPL2P10696 532 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 ALOX12P18054 663 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 DDCP20711 480 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 ACVR2AP27037 513 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 KRT20P35900 424 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 TRIM23P36406 574 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 NCS1P62166 190 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 CSNK1G2P78368 415 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 REEP5Q00765 189 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 PRKCDQ05655 676 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
COPS7B-201ENST00000350033 NXNL2Q5VZ03 156 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 KIAA1614Q5VZ46 1190 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 CEACAM20Q6UY09 585 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 SZRD1Q7Z422 152 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 PLCZ1Q86YW0 608 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 NLGN4XQ8N0W4 816 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 APH1BQ8WW43 257 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 CAMK1GQ96NX5 476 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 TEFMQ96QE5 360 aaKnown RBP12.7□□□□□ -0.38
COPS7B-201ENST00000350033 PHOX2BQ99453 314 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 EPYCQ99645 322 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 RHBGQ9H310 441 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 B3GNT2Q9NY97 397 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 ARHGEF9O43307 516 aa12.7□□□□□ -0.38
COPS7B-201ENST00000350033 WBP4O75554 376 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms