RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RAB41Q5JT25 222 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 OTUD1Q5VV17 481 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 IL17RCQ8NAC3 791 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 INPP5KQ9BT40 448 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 MGAT4AQ9UM21 535 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SLC7A11Q9UPY5 501 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 TCRBV3S1A0A5B6 114 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 FOXE1O00358 373 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 PGFP49763 221 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 XKP51811 444 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 MFSD13AQ14CX5 517 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 QPRTQ15274 297 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 TSPAN33Q86UF1 283 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 LNX2Q8N448 690 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ISG20Q96AZ6 181 aaKnown RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ORAI3Q9BRQ5 295 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 LINC00597Q9H2U6 94 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 GRHPRQ9UBQ7 328 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 WDR45Q9Y484 360 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SCN9AQ15858 1988 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 IQCMA0A1B0GVH7 501 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF35P13682 527 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 TNFRSF1BP20333 461 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ADRA1AP35348 466 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 HLCSP50747 726 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ST3GAL4Q11206 333 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SEC23BQ15437 767 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 FLYWCH1Q4VC44 716 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 GAREM2Q75VX8 874 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 GOT1L1Q8NHS2 421 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 NETO1Q8TDF5 533 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 RAB39BQ96DA2 213 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 SH3YL1Q96HL8 342 aaPredicted RBP10.37□□□□□ -0.75
CLCN6-202ENST00000346436 RBCK1Q9BYM8 510 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 KLHL31Q9H511 634 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 ARMC1Q9NVT9 282 aa10.37□□□□□ -0.75
CLCN6-202ENST00000346436 LOC102723532A0A0G2JNH3 316 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 A0A1B0GVI7 797 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 PRRG2O14669 202 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 MT-ND2P03891 347 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 GSTT2P0CG29 244 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 GSTT2BP0CG30 244 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 DDCP20711 480 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 PSMA1P25786 263 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 BCAP31P51572 246 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 RPS13P62277 151 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 NFATC3Q12968 1075 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TARDBPQ13148 414 aaKnown RBP eCLIP10.36□□□□□ -0.759e-8■■■■■ 29.1
CLCN6-202ENST00000346436 CXorf57Q6NSI4 855 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 KIAA1211LQ6NV74 962 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 USP30Q70CQ3 517 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 NXPE2Q96DL1 559 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TNFRSF12AQ9NP84 129 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM138Q9NPI0 162 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 IFT46Q9NQC8 304 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 VAPAQ9P0L0 249 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ANKMY1Q9P2S6 941 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 DNMT3BQ9UBC3 853 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ANXA2P2A6NMY6 339 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TLR4O00206 839 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF195O14628 629 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 PROM1O43490 865 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 RNF13O43567 381 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ANXA2P07355 339 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 C1GALT1C1LP0DN25 315 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 CD70P32970 193 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 BMP8BP34820 402 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TSTQ16762 297 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 DEFB134Q4QY38 66 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TANGO2Q6ICL3 276 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 BMP8AQ7Z5Y6 402 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 CNTN4Q8IWV2 1026 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 APCDD1Q8J025 514 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 CD200R1Q8TD46 325 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 DDIT4LQ96D03 193 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TRPV4Q9HBA0 871 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 POT1Q9NUX5 634 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 OR1A2Q9Y585 309 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF860A6NHJ4 632 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ACOT8O14734 319 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 HSPA12AO43301 675 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 CDC123O75794 336 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 DCNP07585 359 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 SLC6A4P31645 630 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 MAP3K8P41279 467 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 CLCN2P51788 898 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 NCS1P62166 190 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 TMEM53Q6P2H8 277 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 C3P1Q6ZMU1 363 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 PGBD5Q8N414 524 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF611Q8N823 705 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF420Q8TAQ5 688 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 HDAC2Q92769 488 aaKnown RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 MAL2Q969L2 176 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 ZNF221Q9UK13 617 aa10.36□□□□□ -0.75
CLCN6-202ENST00000346436 A8MV72 311 aaPredicted RBP10.36□□□□□ -0.75
CLCN6-202ENST00000346436 H0YAE9 185 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms