RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 PIGFQ07326 219 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FUT5Q11128 374 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 XAF1Q6GPH4 301 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RNF44Q7L0R7 432 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 B3GNT8Q7Z7M8 397 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OOSP2Q86WS3 158 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KRT73Q86Y46 540 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NUP43Q8NFH3 380 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FAM174AQ8TBP5 190 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MIPOL1Q8TD10 442 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HLA-CQ95604 372 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF566Q969W8 418 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HRASLS5Q96KN8 279 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 EQTNQ9NQ60 294 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TMEM74BQ9NUR3 256 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CDC14AQ9UNH5 594 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MRPS17Q9Y2R5 130 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF860A6NHJ4 632 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 A8MVJ9 347 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NDUFS2O75306 463 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 WNT1P04628 370 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CHRM4P08173 479 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TLX1P31314 330 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 FMO3P31513 532 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 XKP51811 444 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MAD2L1BPQ15013 274 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LAIR1Q6GTX8 287 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TCTN3Q6NUS6 607 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 Q6ZPB1 254 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PRSS41Q7RTY9 318 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RBM45Q8IUH3 476 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR4N5Q8IXE1 308 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TMEFF1Q8IYR6 380 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LRRC25Q8N386 305 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 VANGL1Q8TAA9 524 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 UBE2FQ969M7 185 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 COL26A1Q96A83 441 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ISOC1Q96CN7 298 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ALPK1Q96QP1 1244 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 WFDC6Q9BQY6 131 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BCL2L10Q9HD36 194 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RASSF1Q9NS23 344 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 POFUT2Q9Y2G5 429 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 HCN4Q9Y3Q4 1203 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 SLC22A7Q9Y694 548 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 KCNE3Q9Y6H6 103 aa13.28□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LAMA1P25391 3075 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 METTL12A8MUP2 240 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CCNB2O95067 398 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 POU2F1P14859 743 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 JUNBP17275 347 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CD27P26842 260 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MAOBP27338 520 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 CD38P28907 300 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GNA13Q14344 377 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 COLEC12Q5KU26 742 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ARMC6Q6NXE6 501 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 RBM12BQ8IXT5 1001 aaKnown RBP13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TAGAPQ8N103 731 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF655Q8N720 491 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR4K14Q8NGD5 310 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR4D11Q8NGI4 311 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 BBS10Q8TAM1 723 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 OR7D2Q96RA2 312 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NODALQ96S42 347 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 TUBA1CQ9BQE3 449 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 LIN28AQ9H9Z2 209 aaKnown RBP13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 ZNF556Q9HAH1 456 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 NMNAT1Q9HAN9 279 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 MS4A12Q9NXJ0 267 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 PCDHGA6Q9Y5G7 932 aa13.27□□□□□ -0.28
CDK5RAP1-202ENST00000346416 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 HCRTR1O43613 425 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 PCDHGA12O60330 932 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 NME6O75414 186 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 TRMUO75648 421 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CSF2P04141 144 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GSSP48637 474 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CXCR4P61073 352 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SMN1Q16637 294 aaKnown RBP13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GPAT3Q53EU6 434 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 DEF8Q6ZN54 512 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 HMGN2P46Q86SG4 172 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 COMTD1Q86VU5 262 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 LACC1Q8IV20 430 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 SAMD14Q8IZD0 417 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 CSNK1A1LQ8N752 337 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 OR13F1Q8NGS4 319 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 GIMAP5Q96F15 307 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 PSD2Q9BQI7 771 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 POMT2Q9UKY4 750 aa13.27□□□□□ -0.29
CDK5RAP1-202ENST00000346416 A0A1W2PR77 199 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ZNF701M0R085 212 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 IL9P15248 144 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 ST6GAL1P15907 406 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 MAN2A2P49641 1150 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 MAZP56270 477 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 NUP107P57740 925 aa13.26□□□□□ -0.29
CDK5RAP1-202ENST00000346416 VSX2P58304 361 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms