RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 LILRB1Q8NHL6 650 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 C2CD4CQ8TF44 421 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 DCUN1D1Q96GG9 259 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NFKBIZQ9BYH8 718 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CCDC86Q9H6F5 360 aaKnown RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 IL1RAPQ9NPH3 570 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 WASH6PQ9NQA3 447 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 INIPQ9NRY2 104 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 RPLP0P05388 317 aaKnown RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TSTQ16762 297 aaKnown RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 GPR153Q6NV75 609 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ATCAYQ86WG3 371 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 GALNT12Q8IXK2 581 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 AUTS2Q8WXX7 1259 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 MAP6Q96JE9 813 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ARHGAP39Q9C0H5 1083 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 C2orf40Q9H1Z8 148 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PDE10AQ9Y233 779 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 FAUP35544 74 aaKnown RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ERV3-1Q14264 604 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ARHGAP11BQ3KRB8 267 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TKFCQ3LXA3 575 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 FAM69AQ5T7M9 428 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 SLC7A6Q92536 515 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 MED8Q96G25 268 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 SLC41A3Q96GZ6 507 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 SLC7A11Q9UPY5 501 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PTPRSQ13332 1948 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 C7orf72A4D263 438 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 OGTO15294 1046 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 C2P06681 752 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 GDF10P55107 478 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 BIDP55957 195 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TAP2Q03519 686 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF615Q8N8J6 731 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 MYLPFQ96A32 169 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TMEM185BQ9H7F4 350 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TAS2R9Q9NYW1 312 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PCDHA11Q9Y5I1 949 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 OR1I1O60431 355 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ALPPP05187 535 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 YWHAQP27348 245 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CORO1AP31146 461 aaKnown RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 GALEQ14376 348 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CTF1Q16619 201 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TPRG1LQ5T0D9 272 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PDSS1Q5T2R2 415 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ZDHHC24Q6UX98 284 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 MON1AQ86VX9 555 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 C17orf78Q8N4C9 275 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF276Q8N554 614 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 KREMEN1Q96MU8 473 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 C1QTNF3Q9BXJ4 246 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 FAM221BA6H8Z2 402 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PGPEP1LA6NFU8 196 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NPIPA5E9PKD4 350 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NPIPA3F8WFD2 350 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF404Q494X3 552 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 HES3Q5TGS1 186 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PCYT2Q99447 389 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PRDM12Q9H4Q4 367 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 MOCS1Q9NZB8 636 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NPIPA1Q9UND3 350 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PAPPA2Q9BXP8 1791 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CDC7O00311 574 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 H2AFB1P0C5Y9 115 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 H2AFB2P0C5Z0 115 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF26P17031 533 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NAGAP17050 411 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 OPRL1P41146 370 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 SLC5A12Q1EHB4 618 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NDUFAF6Q330K2 333 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CLLU1Q5K131 121 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ATF7IP2Q5U623 682 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PTCHD4Q6ZW05 846 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NKAPQ8N5F7 415 aaKnown RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 AKR7LQ8NHP1 331 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 SLC7A13Q8TCU3 470 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ACDQ96AP0 544 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TVP23CQ96ET8 276 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CDHR5Q9HBB8 845 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 RGS14O43566 566 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CYP11A1P05108 521 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 YWHAZP63104 245 aaKnown RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ABHD18Q0P651 414 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TBCEQ15813 527 aaPredicted RBP3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ANKK1Q8NFD2 765 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 ZFAND1Q8TCF1 268 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 WFIKKN1Q96NZ8 548 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 REEP4Q9H6H4 257 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TUBG2Q9NRH3 451 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 SLC43A1O75387 559 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PGAM1P18669 254 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 MAP3K8P41279 467 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CDKN2CP42773 168 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 NCS1P62166 190 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 TTLL9Q3SXZ7 439 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 CXorf40AQ8TE69 158 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 LGALS12Q96DT0 336 aa3.38□□□□□ -1.87
SYNE1-201ENST00000341594 PIMREGQ9BSJ6 248 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms