RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TNFRSF11BO00300 401 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 BCKDKO14874 412 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TM4SF5O14894 197 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ZSCAN9O15535 394 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 PROM1O43490 865 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ERAL1O75616 437 aaKnown RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 SERPINB7O75635 380 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 DNAJB5O75953 348 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CLIC3O95833 236 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 BCHEP06276 602 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TYRP1P17643 537 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 MAGP20916 626 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TLX1P31314 330 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TTKP33981 857 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 RYKP34925 604 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ALDH3B2P48448 385 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 HLCSP50747 726 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CRYBA2P53672 197 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CASP9P55211 416 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 KCNC4Q03721 635 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 KEAP1Q14145 624 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TNFAIP8L2Q6P589 184 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 VN1R4Q7Z5H5 301 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 KRT73Q86Y46 540 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 HS3ST5Q8IZT8 346 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ATG16L2Q8NAA4 619 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ADAMTS16Q8TE57 1224 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CNDP2Q96KP4 475 aaKnown RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ZNF300Q96RE9 604 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 SLC38A3Q99624 504 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 APOL4Q9BPW4 351 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ZFYVE21Q9BQ24 234 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 SOX17Q9H6I2 414 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 KRT84Q9NSB2 600 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ZCCHC3Q9NUD5 404 aaKnown RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 EXD2Q9NVH0 621 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 C5AR2Q9P296 337 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TMEFF2Q9UIK5 374 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 KLHL20Q9Y2M5 609 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ATG4BQ9Y4P1 393 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CFAP54Q96N23 3096 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 COL5A1P20908 1838 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 A0A1W2PQM1 296 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CCDC160A6NGH7 325 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 A8MVJ9 347 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 B3GALT2O43825 422 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 FOXD2O60548 495 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 LDOC1O95751 146 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 STATHP02808 62 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 OPN1SWP03999 348 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 IFNW1P05000 195 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 FHP07954 510 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TFPTP0C1Z6 253 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ZNF888P0CJ79 500 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 HOXB3P14651 431 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 PNLIPP16233 465 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 PRKACGP22612 351 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CD1CP29017 333 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ALDH4A1P30038 563 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 RRM2P31350 389 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 GABARAPL2P60520 117 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 CNPY1Q3B7I2 92 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ZNF691Q5VV52 312 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 KLHL35Q6PF15 583 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 RBM44Q6ZP01 1051 aaKnown RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TMPRSS9Q7Z410 1059 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 SZRD1Q7Z422 152 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 Q8N9G6 341 aaPredicted RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 UTP15Q8TED0 518 aaKnown RBP14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 GIPC3Q8TF64 312 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 SLC38A5Q8WUX1 472 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 PROX1Q92786 737 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 TMEM19Q96HH6 336 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 OR2A5Q96R48 311 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 AMBRA1Q9C0C7 1298 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 NDUFAF4Q9P032 175 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 ENOPH1Q9UHY7 261 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 COMMD3-BMI1R4GMX3 469 aa14.3□□□□□ -0.12
TUBB4B-201ENST00000340384 MDC1Q14676 2089 aaKnown RBP14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 RP1P56715 2156 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 OR5K3A6NET4 321 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 C4orf51C9J302 202 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 EMC8O43402 210 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 SLC28A2O43868 658 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 GFRA3O60609 400 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 UBXN7O94888 489 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 DIRAS1O95057 198 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 ANXA8P13928 327 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 MATN1P21941 496 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 ACP1P24666 158 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 GPR3P46089 330 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 LSSP48449 732 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 LIMK1P53667 647 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 SPIBQ01892 262 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 TNFRSF17Q02223 184 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 PPP1R8Q12972 351 aaKnown RBP14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 CEBPEQ15744 281 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 IQCCQ4KMZ1 466 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 FCRL6Q6DN72 434 aa14.29□□□□□ -0.12
TUBB4B-201ENST00000340384 FAM180BQ6P0A1 224 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms