RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ZNF548Q8NEK5 533 aaPredicted RBP13.95□□□□□ -0.18
RET-201ENST00000340058 KCTD7Q96MP8 289 aa13.95□□□□□ -0.18
RET-201ENST00000340058 NMNAT1Q9HAN9 279 aaPredicted RBP13.95□□□□□ -0.18
RET-201ENST00000340058 FAM171A2A8MVW0 826 aa13.95□□□□□ -0.18
RET-201ENST00000340058 TARM1B6A8C7 271 aa13.95□□□□□ -0.18
RET-201ENST00000340058 EIF1AYO14602 144 aaKnown RBP13.95□□□□□ -0.18
RET-201ENST00000340058 MAGEB3O15480 346 aa13.95□□□□□ -0.18
RET-201ENST00000340058 ACSL1P33121 698 aa13.95□□□□□ -0.18
RET-201ENST00000340058 PFN3P60673 137 aa13.95□□□□□ -0.18
RET-201ENST00000340058 CDK5R2Q13319 367 aa13.95□□□□□ -0.18
RET-201ENST00000340058 CLCA4Q14CN2 919 aa13.95□□□□□ -0.18
RET-201ENST00000340058 EXOSC7Q15024 291 aaKnown RBP13.95□□□□□ -0.18
RET-201ENST00000340058 SLC22A16Q86VW1 577 aa13.95□□□□□ -0.18
RET-201ENST00000340058 GPER1Q99527 375 aa13.95□□□□□ -0.18
RET-201ENST00000340058 TAPBPLQ9BX59 468 aa13.95□□□□□ -0.18
RET-201ENST00000340058 ASPNQ9BXN1 380 aa13.95□□□□□ -0.18
RET-201ENST00000340058 HDHD5Q9BXW7 423 aa13.95□□□□□ -0.18
RET-201ENST00000340058 IKZF5Q9H5V7 419 aa13.95□□□□□ -0.18
RET-201ENST00000340058 SEC61A2Q9H9S3 476 aa13.95□□□□□ -0.18
RET-201ENST00000340058 MAN2B2Q9Y2E5 1009 aa13.95□□□□□ -0.18
RET-201ENST00000340058 C1QAP02745 245 aa13.94□□□□□ -0.18
RET-201ENST00000340058 SDC2P34741 201 aa13.94□□□□□ -0.18
RET-201ENST00000340058 MNDAP41218 407 aa13.94□□□□□ -0.18
RET-201ENST00000340058 BMXP51813 675 aa13.94□□□□□ -0.18
RET-201ENST00000340058 ACVR1Q04771 509 aa13.94□□□□□ -0.18
RET-201ENST00000340058 PUM1Q14671 1186 aaKnown RBP eCLIP13.94□□□□□ -0.18
RET-201ENST00000340058 SPATS1Q496A3 300 aa13.94□□□□□ -0.18
RET-201ENST00000340058 ANKRD54Q6NXT1 300 aa13.94□□□□□ -0.18
RET-201ENST00000340058 AKAP14Q86UN6 197 aa13.94□□□□□ -0.18
RET-201ENST00000340058 GATAD2BQ8WXI9 593 aa13.94□□□□□ -0.18
RET-201ENST00000340058 C16orf58Q96GQ5 468 aa13.94□□□□□ -0.18
RET-201ENST00000340058 ZNF300Q96RE9 604 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 TM9SF2Q99805 663 aa13.94□□□□□ -0.18
RET-201ENST00000340058 TTYH2Q9BSA4 534 aa13.94□□□□□ -0.18
RET-201ENST00000340058 CFL2Q9Y281 166 aa13.94□□□□□ -0.18
RET-201ENST00000340058 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
RET-201ENST00000340058 WASHC1A8K0Z3 465 aa13.94□□□□□ -0.18
RET-201ENST00000340058 PORP16435 677 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 ZNF26P17031 533 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 RHCEP18577 417 aa13.94□□□□□ -0.18
RET-201ENST00000340058 GSTM3P21266 225 aa13.94□□□□□ -0.18
RET-201ENST00000340058 CRYZQ08257 329 aaKnown RBP13.94□□□□□ -0.18
RET-201ENST00000340058 DECR1Q16698 335 aa13.94□□□□□ -0.18
RET-201ENST00000340058 ZNF791Q3KP31 576 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 WASH2PQ6VEQ5 465 aa13.94□□□□□ -0.18
RET-201ENST00000340058 B3GLCTQ6Y288 498 aa13.94□□□□□ -0.18
RET-201ENST00000340058 PRR22Q8IZ63 422 aa13.94□□□□□ -0.18
RET-201ENST00000340058 KLHL36Q8N4N3 616 aa13.94□□□□□ -0.18
RET-201ENST00000340058 THEM6Q8WUY1 208 aa13.94□□□□□ -0.18
RET-201ENST00000340058 PATE1Q8WXA2 126 aa13.94□□□□□ -0.18
RET-201ENST00000340058 ERMAPQ96PL5 475 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 MCOLN1Q9GZU1 580 aa13.94□□□□□ -0.18
RET-201ENST00000340058 SLC2A4RGQ9NR83 387 aa13.94□□□□□ -0.18
RET-201ENST00000340058 PAK1IP1Q9NWT1 392 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 A8MV72 311 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 ITGB8P26012 769 aa13.94□□□□□ -0.18
RET-201ENST00000340058 ACVR1BP36896 505 aa13.94□□□□□ -0.18
RET-201ENST00000340058 ABATP80404 500 aa13.94□□□□□ -0.18
RET-201ENST00000340058 PRDX1Q06830 199 aaKnown RBP13.94□□□□□ -0.18
RET-201ENST00000340058 SCN1BQ07699 218 aa13.94□□□□□ -0.18
RET-201ENST00000340058 RPTNQ6XPR3 784 aa13.94□□□□□ -0.18
RET-201ENST00000340058 NAXEQ8NCW5 288 aa13.94□□□□□ -0.18
RET-201ENST00000340058 SRA1Q9HD15 236 aaKnown RBP13.94□□□□□ -0.18
RET-201ENST00000340058 DNMT3AQ9Y6K1 912 aaPredicted RBP13.94□□□□□ -0.18
RET-201ENST00000340058 IRGMA1A4Y4 181 aa13.93□□□□□ -0.18
RET-201ENST00000340058 RCBTB2O95199 551 aa13.93□□□□□ -0.18
RET-201ENST00000340058 BMP1P13497 986 aa13.93□□□□□ -0.18
RET-201ENST00000340058 NPPBP16860 134 aa13.93□□□□□ -0.18
RET-201ENST00000340058 DDCP20711 480 aa13.93□□□□□ -0.18
RET-201ENST00000340058 RORCP51449 518 aa13.93□□□□□ -0.18
RET-201ENST00000340058 UGT3A2Q3SY77 523 aa13.93□□□□□ -0.18
RET-201ENST00000340058 C22orf42Q6IC83 251 aa13.93□□□□□ -0.18
RET-201ENST00000340058 GKN2Q86XP6 184 aa13.93□□□□□ -0.18
RET-201ENST00000340058 SNX29P2Q8IUI4 249 aa13.93□□□□□ -0.18
RET-201ENST00000340058 HORMAD2Q8N7B1 307 aa13.93□□□□□ -0.18
RET-201ENST00000340058 TMIEQ8NEW7 156 aa13.93□□□□□ -0.18
RET-201ENST00000340058 RDH12Q96NR8 316 aa13.93□□□□□ -0.18
RET-201ENST00000340058 USP36Q9P275 1121 aaKnown RBP13.93□□□□□ -0.18
RET-201ENST00000340058 DOCK1Q14185 1865 aa13.93□□□□□ -0.18
RET-201ENST00000340058 POM121BA6NF01 834 aa13.93□□□□□ -0.18
RET-201ENST00000340058 PROM1O43490 865 aa13.93□□□□□ -0.18
RET-201ENST00000340058 CXCL10P02778 98 aa13.93□□□□□ -0.18
RET-201ENST00000340058 PSMD4P55036 377 aaKnown RBP13.93□□□□□ -0.18
RET-201ENST00000340058 YBX1P67809 324 aaKnown RBP13.93□□□□□ -0.18
RET-201ENST00000340058 PON3Q15166 354 aa13.93□□□□□ -0.18
RET-201ENST00000340058 TBPL2Q6SJ96 375 aa13.93□□□□□ -0.18
RET-201ENST00000340058 ZNF852Q6ZMS4 543 aa13.93□□□□□ -0.18
RET-201ENST00000340058 NANOGNBQ7Z5D8 188 aa13.93□□□□□ -0.18
RET-201ENST00000340058 RAB43Q86YS6 212 aa13.93□□□□□ -0.18
RET-201ENST00000340058 TMEM80Q96HE8 168 aa13.93□□□□□ -0.18
RET-201ENST00000340058 ASB16Q96NS5 453 aa13.93□□□□□ -0.18
RET-201ENST00000340058 ZFYVE21Q9BQ24 234 aa13.93□□□□□ -0.18
RET-201ENST00000340058 LGR4Q9BXB1 951 aa13.93□□□□□ -0.18
RET-201ENST00000340058 PRRG4Q9BZD6 226 aa13.93□□□□□ -0.18
RET-201ENST00000340058 PDE7BQ9NP56 450 aa13.93□□□□□ -0.18
RET-201ENST00000340058 TMEM184CQ9NVA4 438 aa13.93□□□□□ -0.18
RET-201ENST00000340058 ACTR10Q9NZ32 417 aa13.93□□□□□ -0.18
RET-201ENST00000340058 CD207Q9UJ71 328 aa13.93□□□□□ -0.18
RET-201ENST00000340058 SLC9B1P1A6NJY1 282 aa13.93□□□□□ -0.18
RET-201ENST00000340058 ZNF3P17036 446 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms