RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LAS2Q8IYD9 372 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 C1orf52Q8N6N3 182 aaKnown RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 OR9A1PQ8NGU1 263 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF514Q96K75 400 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 TRAF4Q9BUZ4 470 aaPredicted RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 TRMT61BQ9BVS5 477 aaKnown RBP17.79■□□□□ 0.44
PSPC1-201ENST00000338910 LGR4Q9BXB1 951 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 HDAC8Q9BY41 377 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 FZD3Q9NPG1 666 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 THSD1Q9NS62 852 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 SH3BP4Q9P0V3 963 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 KCNN3Q9UGI6 736 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 CORO2BQ9UQ03 480 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 PRELID1Q9Y255 219 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 HCN4Q9Y3Q4 1203 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 STON1Q9Y6Q2 735 aa17.79■□□□□ 0.44
PSPC1-201ENST00000338910 WWP2O00308 870 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 PCDH17O14917 1159 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 AKR7A2O43488 359 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 UBL4AP11441 157 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 GPC1P35052 558 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 DRD3P35462 400 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 LIMS1P48059 325 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 C21orf58P58505 322 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 ITPRIPL2Q3MIP1 535 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 CREB3L2Q70SY1 520 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 C11orf96Q7Z7L8 435 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 KLHDC8AQ8IYD2 350 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 UBE2J2Q8N2K1 259 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 NATD1Q8N6N6 113 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 OR2L2Q8NH16 312 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 ENKURQ8TC29 256 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 UCK2Q9BZX2 261 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 ACER3Q9NUN7 267 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 PLAGL1Q9UM63 463 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 GPR34Q9UPC5 381 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 RUVBL1Q9Y265 456 aaKnown RBP17.78■□□□□ 0.44
PSPC1-201ENST00000338910 C17orf113A0A1B0GUU1 675 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 A0A1W2PQL4 384 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-201ENST00000338910 MGAT4DA6NG13 374 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 B8ZZF3 427 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 J3KTA2 159 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 SHOXO15266 292 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 VEGFDO43915 354 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 TPST2O60704 377 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 APODP05090 189 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 PPIBP23284 216 aaKnown RBP17.78■□□□□ 0.44
PSPC1-201ENST00000338910 RPS13P62277 151 aaKnown RBP17.78■□□□□ 0.44
PSPC1-201ENST00000338910 MEF2AQ02078 507 aaPredicted RBP17.78■□□□□ 0.44
PSPC1-201ENST00000338910 TAP2Q03519 686 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 MXD1Q05195 221 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 ZNF33BQ06732 778 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 LAMTOR1Q6IAA8 161 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 CAMKK1Q8N5S9 505 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 DIRAS2Q96HU8 199 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 NECTIN4Q96NY8 510 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 IL17FQ96PD4 163 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 COQ7Q99807 217 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 DUSP26Q9BV47 211 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 RACGAP1Q9H0H5 632 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 TM7SF3Q9NS93 570 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 SLC23A2Q9UGH3 650 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 ENOPH1Q9UHY7 261 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 ASF1AQ9Y294 204 aa17.78■□□□□ 0.44
PSPC1-201ENST00000338910 ENTPD6O75354 484 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 CDRT1O95170 752 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 HBQ1P09105 142 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 ACADLP28330 430 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 AP2S1P53680 142 aaPredicted RBP17.77■□□□□ 0.44
PSPC1-201ENST00000338910 BTBD16Q32M84 506 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 CDONQ4KMG0 1287 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 ESCO2Q56NI9 601 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 FAM46CQ5VWP2 391 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 FRMPD2BQ6IN97 320 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 MED27Q6P2C8 311 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 KLHL17Q6TDP4 642 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 PLET1Q6UQ28 207 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 FBXO15Q8NCQ5 510 aaPredicted RBP17.77■□□□□ 0.44
PSPC1-201ENST00000338910 LINC00615Q96LM1 132 aaPredicted RBP17.77■□□□□ 0.44
PSPC1-201ENST00000338910 NRTNQ99748 197 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 ZDHHC5Q9C0B5 715 aa17.77■□□□□ 0.44
PSPC1-201ENST00000338910 PLEKHB1Q9UF11 243 aaPredicted RBP17.77■□□□□ 0.44
PSPC1-201ENST00000338910 NOS1APO75052 506 aaPredicted RBP17.77■□□□□ 0.43
PSPC1-201ENST00000338910 OR2B3O76000 313 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 IL1AP01583 271 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 ANXA4P09525 319 aaPredicted RBP17.77■□□□□ 0.43
PSPC1-201ENST00000338910 PRKACBP22694 351 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 HMGA2P52926 109 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 CRISP1P54107 249 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 SEC13P55735 322 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 TAS2R38P59533 333 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 RAE1P78406 368 aaKnown RBP17.77■□□□□ 0.43
PSPC1-201ENST00000338910 IDO2Q6ZQW0 420 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 FAM20CQ8IXL6 584 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 SLC34A3Q8N130 599 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 CLDN22Q8N7P3 220 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 RAB7BQ96AH8 199 aa17.77■□□□□ 0.43
PSPC1-201ENST00000338910 KIAA1143Q96AT1 154 aaPredicted RBP17.77■□□□□ 0.43
PSPC1-201ENST00000338910 C11orf24Q96F05 449 aaPredicted RBP17.77■□□□□ 0.43
PSPC1-201ENST00000338910 GTPBP2Q9BX10 602 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms