RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CAV3P56539 151 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 MRPL58Q14197 206 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 WSCD2Q2TBF2 565 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 IQCCQ4KMZ1 466 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 ZMAT1Q5H9K5 638 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 LIPJQ5W064 366 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 C22orf42Q6IC83 251 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SHQ1Q6PI26 577 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 HIST3H2AQ7L7L0 130 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SHFQ7M4L6 423 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PEX5LQ8IYB4 626 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 LNX2Q8N448 690 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 OR5H6Q8NGV6 325 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 GRPEL2Q8TAA5 225 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SPPL3Q8TCT6 385 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 FCGR1BQ92637 280 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 HIST1H2ACQ93077 130 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF689Q96CS4 500 aaPredicted RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 IFT27Q9BW83 186 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 ANKRA2Q9H9E1 313 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SMURF1Q9HCE7 757 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SLC25A37Q9NYZ2 338 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 NLGN3Q9NZ94 848 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PIAS3Q9Y6X2 628 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 LAMA2P24043 3122 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 A0A1B0GVC2 190 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 A0A1W2PPK0 400 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 A6NIN4 97 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 WASHC1A8K0Z3 465 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PRRT4C9JH25 899 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 REM1O75628 298 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 RORCP51449 518 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 IHHQ14623 411 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 EXOC3L2Q2M3D2 409 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 NXPE4Q6UWF7 544 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 WASH2PQ6VEQ5 465 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 ZSWIM9Q86XI8 627 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 OR7G1Q8NGA0 311 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 OTUB2Q96DC9 234 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 TXNDC15Q96J42 360 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 CNDP2Q96KP4 475 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 TOX2Q96NM4 488 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 FAM129BQ96TA1 746 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 UCK2Q9BZX2 261 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 OR8D2Q9GZM6 311 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SLIRPQ9GZT3 109 aaKnown RBP6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SLC22A4Q9H015 551 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 GPR52Q9Y2T5 361 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 PLEKHM1Q9Y4G2 1056 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 SIP14410 1827 aa6.16□□□□□ -1.42
HMG20A-201ENST00000336216 METTL15A6NJ78 407 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 M0R3H8 397 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 GFRA2O00451 464 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CLDN4O14493 209 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CAPN5O15484 640 aaPredicted RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 ICMTO60725 284 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 DNAJB5O75953 348 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 OR2B3O76000 313 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CFIP05156 583 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 GJA4P35212 333 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 GUCA1AP43080 201 aaPredicted RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 SKP1P63208 163 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 SLC7A9P82251 487 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 KCNC4Q03721 635 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 GRIK2Q13002 908 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 SYT6Q5T7P8 510 aaPredicted RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 MLIPQ5VWP3 458 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 REEP3Q6NUK4 255 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 MZT2BQ6NZ67 158 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 RTL4Q6ZR62 310 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 ADGRD2Q7Z7M1 963 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 LAX1Q8IWV1 398 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 OXR1Q8N573 874 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 IQCF1Q8N6M8 205 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 LMX1AQ8TE12 382 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 GGHQ92820 318 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 SLC25A36Q96CQ1 311 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF300Q96RE9 604 aaPredicted RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 DPYSL5Q9BPU6 564 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 QRSL1Q9H0R6 528 aaKnown RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 GORASP2Q9H8Y8 452 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 WDR45Q9Y484 360 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 PCDHB11Q9Y5F2 797 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 POLEQ07864 2286 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 ZNF236Q9UL36 1845 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 TRAV6A0A075B6T7 132 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CLCA1A8K7I4 914 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 FAM227AF5H4B4 570 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 TAPBPO15533 448 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 PRMT3O60678 531 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 SCO1O75880 301 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 TOXO94900 526 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 SLC2A2P11168 524 aaPredicted RBP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 IL7P13232 177 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 ANXA8P13928 327 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 CSNK1DP48730 415 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 RGS6P49758 472 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 HBA1P69905 142 aa6.15□□□□□ -1.42
HMG20A-201ENST00000336216 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMG20A-201ENST00000336216 COX10Q12887 443 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms