RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 H3BSH0 61 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 B4GALT3O60512 393 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 LDB3O75112 727 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 DDCP20711 480 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 CAPN3P20807 821 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 CBX5P45973 191 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 HK3P52790 923 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 CDH15P55291 814 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 FGL2Q14314 439 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 EXOC3L2Q2M3D2 409 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 RASSF6Q6ZTQ3 369 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 RAB43Q86YS6 212 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF440Q8IYI8 595 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 LRRC17Q8N6Y2 441 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 PNLDC1Q8NA58 520 aaKnown RBP14.26□□□□□ -0.13
C9orf47-201ENST00000334490 CIDECQ96AQ7 238 aaPredicted RBP14.26□□□□□ -0.13
C9orf47-201ENST00000334490 SLC39A1Q9NY26 324 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 SARDHQ9UL12 918 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 AP1M2Q9Y6Q5 423 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 A0A1W2PPL8 197 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 CTBP2P56545 445 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 RAB25P57735 213 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 MEP1AQ16819 746 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 ALG1LQ6GMV1 187 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 OR6N2Q8NGY6 317 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 TANKQ92844 425 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 SLC6A18Q96N87 628 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 DHRS4Q9BTZ2 278 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 LAMP5Q9UJQ1 280 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 GNG8Q9UK08 70 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF222Q9UK12 451 aa14.26□□□□□ -0.13
C9orf47-201ENST00000334490 HTRA2O43464 458 aaPredicted RBP14.25□□□□□ -0.13
C9orf47-201ENST00000334490 RACK1P63244 317 aaKnown RBP14.25□□□□□ -0.13
C9orf47-201ENST00000334490 PAMR1Q6UXH9 720 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 ADAMTSL4Q6UY14 1074 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 HACD2Q6Y1H2 254 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 ZSWIM9Q86XI8 627 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 MARCH9Q86YJ5 346 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 MEIOBQ8N635 442 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 AGBL5Q8NDL9 886 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 OR13H1Q8NG92 308 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 RAB2BQ8WUD1 216 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 HS6ST2Q96MM7 605 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 INPP5KQ9BT40 448 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 GAREM1Q9H706 876 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 NANSQ9NR45 359 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 MMP17Q9ULZ9 603 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 LINC01565O15544 149 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 DHFRP00374 187 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 CASP6P55212 293 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 SETD6Q8TBK2 473 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 CRELD1Q96HD1 420 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 FBXL20Q96IG2 436 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 SLC45A3Q96JT2 553 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 MS4A4EQ96PG1 132 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF304Q9HCX3 659 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 CCM2LQ9NUG4 571 aaPredicted RBP14.25□□□□□ -0.13
C9orf47-201ENST00000334490 UPB1Q9UBR1 384 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 PEX16Q9Y5Y5 336 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 A0A0G2JPF8 293 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 HNRNPCL3B7ZW38 293 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 TAF4O00268 1085 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 ZNF208O43345 1280 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 SEMA3DO95025 777 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 CLIC3O95833 236 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 HNRNPCL4P0DMR1 293 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 RHCEP18577 417 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 HIST1H1TP22492 207 aaPredicted RBP14.25□□□□□ -0.13
C9orf47-201ENST00000334490 GABRB3P28472 473 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 SGCAQ16586 387 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 NAGSQ8N159 534 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 OR2T33Q8NG76 320 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 OR51G2Q8NGK0 314 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 LKAAEAR1Q8TD35 194 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 SGTBQ96EQ0 304 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 YTHDF1Q9BYJ9 559 aaKnown RBP14.25□□□□□ -0.13
C9orf47-201ENST00000334490 B3GNT4Q9C0J1 378 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 HOXD1Q9GZZ0 328 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 A0A1W2PRQ8 180 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 CIB4A0PJX0 185 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 A6NL46 340 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 BRINP1O60477 761 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 RAB36O95755 333 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 CDKL1Q00532 357 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 PJA1Q8NG27 643 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 TTTY10Q9BZA0 68 aa14.25□□□□□ -0.13
C9orf47-201ENST00000334490 ACOT7O00154 380 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 TGFBR2P37173 567 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 GCGRP47871 477 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 DCDC1P59894 354 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 KCNAB2Q13303 367 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 TMEM52BQ4KMG9 183 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ALG10BQ5I7T1 473 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 DPY19L2P1Q6NXN4 242 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 VTCN1Q7Z7D3 282 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ATOH1Q92858 354 aaPredicted RBP14.24□□□□□ -0.13
C9orf47-201ENST00000334490 BORCS5Q969J3 196 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 KCTD7Q96MP8 289 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ANKRA2Q9H9E1 313 aa14.24□□□□□ -0.13
C9orf47-201ENST00000334490 ERVK-19Q9WJR5 959 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms