RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ACBD6Q9BR61 282 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 IL21RQ9HBE5 538 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 COPZ2Q9P299 210 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 A0A1W2PP18 115 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 FGF3P11487 239 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 MAOAP21397 527 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 SOX3P41225 446 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 AFF3P51826 1226 aaKnown RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 PPIGQ13427 754 aaKnown RBP eCLIP7.57□□□□□ -1.2
CIITA-201ENST00000324288 POLDIP3Q9BY77 421 aaKnown RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 PCDHB16Q9NRJ7 776 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 ZDHHC3Q9NYG2 299 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 HAO2Q9NYQ3 351 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 SARDHQ9UL12 918 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 LTN1O94822 1766 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 BCAS1O75363 584 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 CNTN5O94779 1100 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 IL1R2P27930 398 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 BMP8BP34820 402 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 BMP8AQ7Z5Y6 402 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 SERPINA12Q8IW75 414 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 WDSUB1Q8N9V3 476 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 OR56B2PQ8NGI1 322 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 CIDECQ96AQ7 238 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 ICKQ9UPZ9 632 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 DLGAP4Q9Y2H0 992 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 COL6A6A6NMZ7 2263 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 RAD51DO75771 328 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 TMEM164Q5U3C3 297 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.57□□□□□ -1.2
CIITA-201ENST00000324288 MRPL38Q96DV4 380 aaKnown RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 DHDHQ9UQ10 334 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 NPIPA2E9PIF3 369 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 NPIPA3F8WFD2 350 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 BHLHE40O14503 412 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 LILRB5O75023 590 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 GATMP50440 423 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 DAOAP59103 153 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 MBTPS1Q14703 1052 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 GLT8D1Q68CQ7 371 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 KIAA0930Q6ICG6 404 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 MCATQ8IVS2 390 aaKnown RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 CHDHQ8NE62 594 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 THRSPQ92748 146 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 SAMD10Q9BYL1 202 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 NSUN3Q9H649 340 aaKnown RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 SLA2Q9H6Q3 261 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 ZDHHC4Q9NPG8 344 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 C19orf12Q9NSK7 152 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 A0A0G2JMP0 313 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 A0A1W2PQL4 384 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 POP7O75817 140 aaKnown RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 PIGRP01833 764 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 POLR2CP19387 275 aaPredicted RBP7.57□□□□□ -1.2
CIITA-201ENST00000324288 UGT2B10P36537 528 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 DLSTP36957 453 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 ZNF767PQ75MW2 155 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 OR4M2Q8NGB6 313 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 OR2T35Q8NGX2 323 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 NPRL2Q8WTW4 380 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 FAXDC2Q96IV6 333 aa7.57□□□□□ -1.2
CIITA-201ENST00000324288 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.57□□□□□ -1.2
CIITA-201ENST00000324288 TSTD3H0UI37 97 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ADAP00813 363 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TFP02787 698 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 SERPINA7P05543 415 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CDK1P06493 297 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CD53P19397 219 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CHATP28329 748 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 DCUN1D3Q8IWE4 304 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 BEST4Q8NFU0 473 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 OR56A1Q8NGH5 318 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 OR5H2Q8NGV7 314 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 EIF2B3Q9NR50 452 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 ACTR10Q9NZ32 417 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 KLHL9Q9P2J3 617 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 EPHA6Q9UF33 1036 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CBY3A6NI87 242 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ICMTO60725 284 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PROS1P07225 676 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PABPC4LP0CB38 370 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 YBEYP58557 167 aaPredicted RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 OGDHQ02218 1023 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 IRF5Q13568 498 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CCL14Q16627 93 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 MPP7Q5T2T1 576 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 HIST2H3PS2Q5TEC6 136 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 FAM180BQ6P0A1 224 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CLEC20AQ6ZU45 233 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TTLQ8NG68 377 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 FKBP10Q96AY3 582 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 BOLA1Q9Y3E2 137 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 BACE2Q9Y5Z0 518 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CACNA1SQ13698 1873 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 GABRA3P34903 492 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 NPRL3Q12980 569 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 GPM6BQ13491 265 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PDSS1Q5T2R2 415 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 FKBP1CQ5VVH2 108 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms