RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SLC25A19Q9HC21 320 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 SLC35C2Q9NQQ7 365 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 WDR70Q9NW82 654 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 GPR52Q9Y2T5 361 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 KCNE3Q9Y6H6 103 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 ISPDA4D126 451 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 TEKQ02763 1124 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 PRKCDQ05655 676 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 MAP4K2Q12851 820 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 SLAMF1Q13291 335 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 SLX4IPQ5VYV7 408 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 ACSM5Q6NUN0 579 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 TUBA3EQ6PEY2 450 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 KRT73Q86Y46 540 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 LRR1Q96L50 414 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 NXF2Q9GZY0 626 aaKnown RBP16.45■□□□□ 0.22
COL9A1-201ENST00000320755 WASH6PQ9NQA3 447 aa16.45■□□□□ 0.22
COL9A1-201ENST00000320755 SNRNP200O75643 2136 aaKnown RBP16.45■□□□□ 0.22
COL9A1-201ENST00000320755 HAT1O14929 419 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 HMGN2P05204 90 aaKnown RBP16.44■□□□□ 0.22
COL9A1-201ENST00000320755 HBQ1P09105 142 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 PSMA1P25786 263 aaKnown RBP16.44■□□□□ 0.22
COL9A1-201ENST00000320755 TNFSF8P32971 234 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SLC15A1P46059 708 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 HOXC5Q00444 222 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 TMEM107Q6UX40 140 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ADAMTSL4Q6UY14 1074 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 USP30Q70CQ3 517 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 GDPD3Q7L5L3 318 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ADGRD2Q7Z7M1 963 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 TBC1D19Q8N5T2 526 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 CELF2-AS1Q8N7Q2 184 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 OR8J1Q8NGP2 316 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 FGF13Q92913 245 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ZG16BQ96DA0 208 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 WDR26Q9H7D7 661 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SP140LQ9H930 580 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ATG4BQ9Y4P1 393 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SZT2Q5T011 3432 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 USP34Q70CQ2 3546 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 A0A1W2PP55 124 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 LRIT2A6NDA9 550 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 MYL12BO14950 172 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 MAT2AP31153 395 aaKnown RBP16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SOX9P48436 509 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 TAS2R38P59533 333 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ARHGAP19Q14CB8 494 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SNAPC1Q16533 368 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 CLEC12AQ5QGZ9 265 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SHFQ7M4L6 423 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 TMEM145Q8NBT3 493 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 CPNE5Q9HCH3 593 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 RPL36Q9Y3U8 105 aaKnown RBP16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SCN2AQ99250 2005 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 LINC01553A4QN01 128 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 C4orf51C9J302 202 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 KMOO15229 486 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SCG5P05408 212 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 CHRM4P08173 479 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 DRD3P35462 400 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 VASPP50552 380 aaPredicted RBP16.44■□□□□ 0.22
COL9A1-201ENST00000320755 DUSP2Q05923 314 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ZMAT1Q5H9K5 638 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ATAD3BQ5T9A4 648 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 C18orf63Q68DL7 685 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 DGLUCYQ7Z3D6 616 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 TRNT1Q96Q11 434 aaKnown RBP16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SLC30A2Q9BRI3 323 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 EGLN3Q9H6Z9 239 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 SLC9A8Q9Y2E8 581 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 TSC22D4Q9Y3Q8 395 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 GPSM3Q9Y4H4 160 aa16.44■□□□□ 0.22
COL9A1-201ENST00000320755 ARRDC5A6NEK1 342 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 BCL6P41182 706 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 SNRPGP62308 76 aaKnown RBP16.43■□□□□ 0.22
COL9A1-201ENST00000320755 DAB2P98082 770 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 PRDX1Q06830 199 aaKnown RBP16.43■□□□□ 0.22
COL9A1-201ENST00000320755 SLC9A5Q14940 896 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 KCNJ8Q15842 424 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 HDDC3Q8N4P3 179 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 OR9Q1Q8NGQ5 310 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 OR2A1Q8NGT9 310 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 CAMK1GQ96NX5 476 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 BARHL1Q9BZE3 327 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 PCBD2Q9H0N5 130 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 HCN2Q9UL51 889 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 NTSP30990 170 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 LIMK1P53667 647 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 PSRC1Q6PGN9 363 aaPredicted RBP16.43■□□□□ 0.22
COL9A1-201ENST00000320755 AKAP14Q86UN6 197 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 GPR151Q8TDV0 419 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 ASB16Q96NS5 453 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 DDX31Q9H8H2 851 aaKnown RBP16.43■□□□□ 0.22
COL9A1-201ENST00000320755 MARCH7Q9H992 704 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 FZD3Q9NPG1 666 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 KLHL3Q9UH77 587 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 YARS2Q9Y2Z4 477 aaKnown RBP16.43■□□□□ 0.22
COL9A1-201ENST00000320755 GPC6Q9Y625 555 aaPredicted RBP16.43■□□□□ 0.22
COL9A1-201ENST00000320755 A3GALT2U3KPV4 340 aa16.43■□□□□ 0.22
COL9A1-201ENST00000320755 GON4LQ3T8J9 2241 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms