RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 GPR174Q9BXC1 333 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 RAB11FIP5Q9BXF6 653 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 STARD5Q9NSY2 213 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 ASB4Q9Y574 426 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 LOC105369274A0A096LPK9 316 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 LOC102723532A0A0G2JNH3 316 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 LRRC72A6NJI9 287 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 P2RX6O15547 441 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 PCDHGA12O60330 932 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 TGFBR1P36897 503 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 NUDT6P53370 316 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 NCS1P62166 190 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 RBBP4Q09028 425 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 SLC13A2Q13183 592 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 CCINQ13939 588 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 ZIC1Q15915 447 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 LEXMQ3ZCV2 418 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 LACC1Q8IV20 430 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 OR4N4Q8N0Y3 316 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 OR2L5Q8NG80 312 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 OR9A2Q8NGT5 310 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 TOE1Q96GM8 510 aaKnown RBP11.73□□□□□ -0.53
RNF4-201ENST00000314289 GABARAPL1Q9H0R8 117 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 NT5DC2Q9H857 520 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 AP1M2Q9Y6Q5 423 aa11.73□□□□□ -0.53
RNF4-201ENST00000314289 FFAR1O14842 300 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 HMGN2P05204 90 aaKnown RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 F3P13726 295 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 TGM1P22735 817 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 POU1F1P28069 291 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 MRPS21P82921 87 aaKnown RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 EMX1Q04741 257 aaPredicted RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 RFX4Q33E94 735 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 CRB2Q5IJ48 1285 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 FRMPD2BQ6IN97 320 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 FAHD1Q6P587 224 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 PRSS41Q7RTY9 318 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 PIAS4Q8N2W9 510 aaPredicted RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 ZNF540Q8NDQ6 660 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 SUN3Q8TAQ9 357 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 RORBQ92753 470 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 TREX2Q9BQ50 279 aaPredicted RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 NEUROD4Q9HD90 331 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 ABCB10Q9NRK6 738 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 ACER3Q9NUN7 267 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 M0R3H8 397 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 ADAMDEC1O15204 470 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 GADD45GO95257 159 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 NR2F1P10589 423 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 ITGAMP11215 1152 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 TYRP1P17643 537 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 MC3RP41968 323 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 KIAA1024LP59773 190 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.53
RNF4-201ENST00000314289 FBXO42Q6P3S6 717 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 PLEKHG7Q6ZR37 379 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 MEX3DQ86XN8 651 aaKnown RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 Q8N9G6 341 aaPredicted RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 PHF10Q8WUB8 498 aaKnown RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 S100ZQ8WXG8 99 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 SLC35G5Q96KT7 338 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 EPYCQ99645 322 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 SCML1Q9UN30 329 aa11.72□□□□□ -0.53
RNF4-201ENST00000314289 MRPS2Q9Y399 296 aaKnown RBP11.72□□□□□ -0.53
RNF4-201ENST00000314289 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 TRBV4-1A0A0J9YWV2 114 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 FADS2O95864 444 aaKnown RBP11.71□□□□□ -0.53
RNF4-201ENST00000314289 IFNW1P05000 195 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 IGHV4-34P06331 123 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 IGFBP1P08833 259 aaPredicted RBP11.71□□□□□ -0.53
RNF4-201ENST00000314289 ALOX5P09917 674 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 PCMT1P22061 227 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 RNF144AP50876 292 aaPredicted RBP11.71□□□□□ -0.53
RNF4-201ENST00000314289 SIM1P81133 766 aaPredicted RBP11.71□□□□□ -0.53
RNF4-201ENST00000314289 DGUOKQ16854 277 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 EOGTQ5NDL2 527 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 AGAP7PQ5VUJ5 663 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 ZNF425Q6IV72 752 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 AHSA2Q719I0 299 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 MFSD4AQ8N468 514 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 FAR1Q8WVX9 515 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 GEMIN6Q8WXD5 167 aaKnown RBP11.71□□□□□ -0.53
RNF4-201ENST00000314289 DACH2Q96NX9 599 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 FAIM2Q9BWQ8 316 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 OR6C2Q9NZP2 312 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 SEC14L3Q9UDX4 400 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 NDRG4Q9ULP0 352 aaKnown RBP11.71□□□□□ -0.53
RNF4-201ENST00000314289 MMP17Q9ULZ9 603 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 UGT2B7P16662 529 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 ITIH1P19827 911 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 SERPINB1P30740 379 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 NTSP30990 170 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 AKT2P31751 481 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 KRT20P35900 424 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 XCR1P46094 333 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 LSSP48449 732 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 SEPHS1P49903 392 aa11.71□□□□□ -0.53
RNF4-201ENST00000314289 MVKQ03426 396 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms