RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ARL10Q8N8L6 244 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 NUP43Q8NFH3 380 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 OR10Q1Q8NGQ4 319 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 SPPL2AQ8TCT8 520 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 CYGBQ8WWM9 190 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 ZNF300Q96RE9 604 aaPredicted RBP11.28□□□□□ -0.6
TPM3-202ENST00000302206 MAP3K3Q99759 626 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 SPATA5L1Q9BVQ7 753 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 BTBD2Q9BX70 525 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 ACTRT3Q9BYD9 372 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 UCKL1Q9NWZ5 548 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 VNN3Q9NY84 501 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 CALML5Q9NZT1 146 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 NDUFAF4Q9P032 175 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 SEMA5BQ9P283 1151 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 C3orf18Q9UK00 162 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 GMEB2Q9UKD1 530 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 RAB23Q9ULC3 237 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 MYRFQ9Y2G1 1151 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 NAALAD2Q9Y3Q0 740 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 SAMHD1Q9Y3Z3 626 aaKnown RBP11.28□□□□□ -0.6
TPM3-202ENST00000302206 ORC6Q9Y5N6 252 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 GPC6Q9Y625 555 aaPredicted RBP11.28□□□□□ -0.6
TPM3-202ENST00000302206 RNF215Q9Y6U7 377 aa11.28□□□□□ -0.6
TPM3-202ENST00000302206 TP53BP1Q12888 1972 aaPredicted RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 DUXAA6NLW8 204 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 A8MVJ9 347 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 H3BNH8 94 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 SLC28A2O43868 658 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 BMP10O95393 424 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 H6PDO95479 791 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 GPR75O95800 540 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 ATP1B1P05026 303 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 HMGN2P05204 90 aaKnown RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 SMIM18P0DKX4 95 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 C8orf89P0DMQ9 161 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 NR2F1P10589 423 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 ITGAMP11215 1152 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 GLB1P16278 677 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 PORP16435 677 aaPredicted RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 MC3RP41968 323 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 ARRB1P49407 418 aaPredicted RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 MAN2A2P49641 1150 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 CRISP3P54108 245 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 SNRPNP63162 240 aaKnown RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 CSTF1Q05048 431 aaKnown RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 IL18R1Q13478 541 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 FAM53BQ14153 422 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 GPR19Q15760 415 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 ZNF750Q32MQ0 723 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 KCTD21Q4G0X4 260 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 FAHD1Q6P587 224 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 TMEM107Q6UX40 140 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 TSEN54Q7Z6J9 526 aaKnown RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 OR2L13Q8N349 312 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 ZNF555Q8NEP9 628 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 OR9A2Q8NGT5 310 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 ZNF675Q8TD23 568 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 APOBEC4Q8WW27 367 aaKnown RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 GAB3Q8WWW8 586 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 RAB8BQ92930 207 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 MS4A4EQ96PG1 132 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 CSF3RQ99062 836 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 ELF4Q99607 663 aaPredicted RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 PSD2Q9BQI7 771 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 MRPS26Q9BYN8 205 aaKnown RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 SMURF2Q9HAU4 748 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 PDE7BQ9NP56 450 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 EXD2Q9NVH0 621 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 LRIT1Q9P2V4 623 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 TMEFF2Q9UIK5 374 aaPredicted RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 RALYQ9UKM9 306 aaKnown RBP11.27□□□□□ -0.61
TPM3-202ENST00000302206 ENPP4Q9Y6X5 453 aa11.27□□□□□ -0.61
TPM3-202ENST00000302206 TDRD6O60522 2096 aaKnown RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 FITM1A5D6W6 292 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 DPPA5A6NC42 116 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 TRIM64A6NGJ6 449 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 SLC16A6O15403 523 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 YKT6O15498 198 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 SDC3O75056 442 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 DNAJB6O75190 326 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 SOX30O94993 753 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 NSA2O95478 260 aaKnown RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 ZBTB11O95625 1053 aaPredicted RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 OPN1SWP03999 348 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 IFNW1P05000 195 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 RHCEP18577 417 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 CDH2P19022 906 aaPredicted RBP11.26□□□□□ -0.61
TPM3-202ENST00000302206 XCR1P46094 333 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 KCNJ5P48544 419 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 HMGA2P52926 109 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 GPLD1P80108 840 aa11.26□□□□□ -0.61
TPM3-202ENST00000302206 SIM1P81133 766 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 196.2 ms