RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TRIM40Q6P9F5 258 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ADGRD2Q7Z7M1 963 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 NR2C2APQ86WQ0 139 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 MARCH9Q86YJ5 346 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SLC7A13Q8TCU3 470 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 METTL2AQ96IZ6 378 aaKnown RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 KLHL15Q96M94 604 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 BHLHE41Q9C0J9 482 aaPredicted RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SGK2Q9HBY8 427 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 PRM3Q9NNZ6 103 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 EXTL2Q9UBQ6 330 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SRRDQ9UH36 339 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ANGPT4Q9Y264 503 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 MYADML2A6NDP7 307 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 AGAP14A8MT82 685 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 PPM1BO75688 479 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 VNN2O95498 520 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 PTBP1P26599 531 aaKnown RBP eCLIP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 RAB8AP61006 207 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 CTAG1AP78358 180 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 GPR33Q49SQ1 333 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 LYPLAL1Q5VWZ2 237 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 GDF6Q6KF10 455 aaPredicted RBP10.31□□□□□ -0.76
ZNF558-201ENST00000301475 DEF8Q6ZN54 512 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ADGRG3Q86Y34 549 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ZNF485Q8NCK3 441 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 NEIL3Q8TAT5 605 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 FOXJ1Q92949 421 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 OR4K3Q96R72 315 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ADAM2Q99965 735 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 ABCG5Q9H222 651 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 REEP4Q9H6H4 257 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 MVB12BQ9H7P6 319 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 GKN1Q9NS71 199 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 SEMA3GQ9NS98 782 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 TMEM161AQ9NX61 479 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 TRPM5Q9NZQ8 1165 aa10.31□□□□□ -0.76
ZNF558-201ENST00000301475 LOC105369274A0A096LPK9 316 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 A0A1B0GVC2 190 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 TRDV1A0A1B0GX56 115 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 A6NIN4 97 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 GFYI3L273 518 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 CCT3P49368 545 aaKnown RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 SRP54P61011 504 aaKnown RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 RPS13P62277 151 aaKnown RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 LRRC74AQ0VAA2 488 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 KLHL12Q53G59 568 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 RAET1GQ6H3X3 334 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 ARSKQ6UWY0 536 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 IL20RBQ6UXL0 311 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 LIPIQ6XZB0 460 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 THOC6Q86W42 341 aaKnown RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 SLC30A8Q8IWU4 369 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 OR4N4Q8N0Y3 316 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 GPA33Q99795 319 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 ARHGAP9Q9BRR9 750 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 ERVMER34-1Q9H9K5 563 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 TBC1D17Q9HA65 648 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 ZDHHC3Q9NYG2 299 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 ATP6V1HQ9UI12 483 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 PHF11Q9UIL8 331 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 GPR52Q9Y2T5 361 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 PIPSLA2A3N6 862 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 NPIPB15A6NHN6 443 aaPredicted RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 H0YIV9 168 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 FAAHO00519 579 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 GABRPO00591 440 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 UGDHO60701 494 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 H1F0P07305 194 aaKnown RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 PRKACAP17612 351 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 CORO1AP31146 461 aaKnown RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 DSG2Q14126 1118 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 GINS1Q14691 196 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 CTXN3Q4LDR2 81 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 C17orf99Q6UX52 265 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 FAM92BQ6ZTR7 304 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 OR7G3Q8NG95 312 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 RIT1Q92963 219 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 RBPMSQ93062 196 aaKnown RBP10.3□□□□□ -0.76
ZNF558-201ENST00000301475 RNFT2Q96EX2 444 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 PPA2Q9H2U2 334 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 FAM8A1Q9UBU6 413 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 UBQLN2Q9UHD9 624 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 PLXND1Q9Y4D7 1925 aa10.3□□□□□ -0.76
ZNF558-201ENST00000301475 CD8B2A6NJW9 211 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 IFNA7P01567 189 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 FURINP09958 794 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CD8BP10966 210 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CSNK1DP48730 415 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 SRP9P49458 86 aaKnown RBP10.29□□□□□ -0.76
ZNF558-201ENST00000301475 HSF2Q03933 536 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CRYZQ08257 329 aaKnown RBP10.29□□□□□ -0.76
ZNF558-201ENST00000301475 PUDPQ08623 228 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 ARHGAP15Q53QZ3 475 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 MORN1Q5T089 497 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 VASNQ6EMK4 673 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 GRHL2Q6ISB3 625 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 RTL4Q6ZR62 310 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 CHST9Q7L1S5 443 aa10.29□□□□□ -0.76
ZNF558-201ENST00000301475 TECPR1Q7Z6L1 1165 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms