RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 HSD17B2P37059 387 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 KCNC4Q03721 635 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 CD300CQ08708 224 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 TARDBPQ13148 414 aaKnown RBP eCLIP11.1□□□□□ -0.63
RHO-201ENST00000296271 SRSF5Q13243 272 aaKnown RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 C6orf132Q5T0Z8 1188 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 UBE2UQ5VVX9 321 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 PRSS41Q7RTY9 318 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 VRK2Q86Y07 508 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 KIAA1958Q8N8K9 716 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 LCN9Q8WX39 176 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 ELSPBP1Q96BH3 223 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 ITPAQ9BY32 194 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 SLIRPQ9GZT3 109 aaKnown RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 TCEAL2Q9H3H9 227 aaPredicted RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 FKBP14Q9NWM8 211 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 VPS13AQ96RL7 3174 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 P2RX6O15547 441 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 LRRTM2O43300 516 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 FCMRO60667 390 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 TP53P04637 393 aaPredicted RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 CHRM5P08912 532 aaPredicted RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 ZNF888P0CJ79 500 aaPredicted RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 EIF2DP41214 584 aaKnown RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 MAP4K2Q12851 820 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 GPAT3Q53EU6 434 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 TJAP1Q5JTD0 557 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 PGBD2Q6P3X8 592 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 PODNL1Q6PEZ8 512 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 KIAA1324Q6UXG2 1013 aaKnown RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 ADCK1Q86TW2 530 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 SVOPQ8N4V2 548 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 PSD4Q8NDX1 1056 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 OR10G6Q8NH81 332 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 BMFQ96LC9 184 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 CHCHD6Q9BRQ6 235 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 SLC28A3Q9HAS3 691 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 AKIP1Q9NQ31 210 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 MAN2C1Q9NTJ4 1040 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 MRPS2Q9Y399 296 aaKnown RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 CENPVL1A0A0U1RR11 272 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CACNB4O00305 520 aaPredicted RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 AIREO43918 545 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CTSVO60911 334 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 RASGRP1O95267 797 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 H1F0P07305 194 aaKnown RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 CELA2BP08218 269 aaPredicted RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 ACTR1BP42025 376 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 PXNP49023 591 aaPredicted RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 ACTR1AP61163 376 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CHRNEQ04844 493 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 MED22Q15528 200 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 ARMCX4Q5H9R4 360 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 DCST1Q5T197 706 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 MRM1Q6IN84 353 aaKnown RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 FAM111BQ6SJ93 734 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 ZER1Q7Z7L7 766 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 AMIGO1Q86WK6 493 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CROCCP3Q8IVE0 287 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 MFSD4AQ8N468 514 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 TBC1D19Q8N5T2 526 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 TRUB1Q8WWH5 349 aaKnown RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 IPCEF1Q8WWN9 437 aaPredicted RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 SLC38A4Q969I6 547 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 SIPA1Q96FS4 1042 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 Q96MT0 163 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 SLC6A18Q96N87 628 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 QRFPRQ96P65 431 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 MIR1-1HGQ9H1L0 117 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 DCSTAMPQ9H295 470 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 NT5DC2Q9H857 520 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CES1P1Q9UKY3 287 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CHST2Q9Y4C5 530 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 GPC6Q9Y625 555 aaPredicted RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 SLCO1B1Q9Y6L6 691 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 LOC105369274A0A096LPK9 316 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 LOC102723532A0A0G2JNH3 316 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 WWP2O00308 870 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 SLC22A1O15245 554 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 TBX19O60806 448 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CTSBP07858 339 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 MMP11P24347 488 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CTHP32929 405 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 CLK1P49759 484 aaKnown RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 PPP1CAP62136 330 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 SIM1P81133 766 aaPredicted RBP11.09□□□□□ -0.63
RHO-201ENST00000296271 INAQ16352 499 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 IQCHQ86VS3 1027 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 OR4N4Q8N0Y3 316 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 TCEANCQ8N8B7 351 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 OR2L5Q8NG80 312 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 MRGPRX1Q96LB2 322 aa11.09□□□□□ -0.63
RHO-201ENST00000296271 OR2M4Q96R27 311 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms