RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 RACK1P63244 317 aaKnown RBP16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 MPP2Q14168 576 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 USP43Q70EL4 1123 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 SPATC1Q76KD6 591 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF554Q86TJ5 538 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR6N2Q8NGY6 317 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 CHFRQ96EP1 664 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 GNG8Q9UK08 70 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 UNC119BA6NIH7 251 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 SRPX2O60687 465 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 SEMA3DO95025 777 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 EGFP01133 1207 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 HLA-DPB1P04440 258 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 ITGA5P08648 1049 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 MAPK3P27361 379 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 NR0B1P51843 470 aaKnown RBP16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 JAGN1Q8N5M9 183 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 MFSD2AQ8NA29 543 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR51A7Q8NH64 312 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 FAM129BQ96TA1 746 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 TRNAU1APQ9NX07 287 aaKnown RBP16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 TBX10O75333 385 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 ATXN1LP0C7T5 689 aaKnown RBP16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 TRNP1Q6NT89 227 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 PLEKHG7Q6ZR37 379 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 MINDY1Q8N5J2 469 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR13J1Q8NGT2 312 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 PKP2Q99959 881 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 STRCQ7RTU9 1775 aa16.84■□□□□ 0.29
CDC42EP3-201ENST00000295324 ANHXE9PGG2 379 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 C1orf105O95561 183 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 IGHEP01854 428 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 FGF4P08620 206 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 ETS2P15036 469 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 RORCP51449 518 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 NUDT6P53370 316 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 DLX2Q07687 328 aaPredicted RBP16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 MARCH9Q86YJ5 346 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 OR2L3Q8NG85 312 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 METTL2AQ96IZ6 378 aaKnown RBP16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 NANSQ9NR45 359 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 ACSL6Q9UKU0 697 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF451Q9Y4E5 1061 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 PHIPQ8WWQ0 1821 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 CD36P16671 472 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 ACOT4Q8N9L9 421 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 NSMAFQ92636 917 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 MOCOSQ96EN8 888 aa16.83■□□□□ 0.29
CDC42EP3-201ENST00000295324 PDHA2P29803 388 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 ARG2P78540 354 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF77Q15935 545 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 LETMD1Q6P1Q0 360 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 DHRS1Q96LJ7 313 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 METTL21EPA6NDL7 271 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 SGK494L7N484 410 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 MT-ND5P03915 603 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 HCKP08631 526 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 RHCEP18577 417 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 PRKACGP22612 351 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 CRYZQ08257 329 aaKnown RBP16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 MFSD13AQ14CX5 517 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 TYSND1Q2T9J0 566 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 VWA5B2Q8N398 1253 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 CREB3L4Q8TEY5 395 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF480Q8WV37 535 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 NT5C3BQ969T7 300 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 PHF12Q96QT6 1004 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 BLACEA4D250 179 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 TFECO14948 347 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 CD27P26842 260 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 CLCA4Q14CN2 919 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 HACD2Q6Y1H2 254 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 CCDC36Q8IYA8 594 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 TEX26Q8N6G2 289 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 ASB11Q8WXH4 323 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 SGCDQ92629 289 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZFP3Q96NJ6 502 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 UHRF1Q96T88 793 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 PRSS21Q9Y6M0 314 aa16.83■□□□□ 0.28
CDC42EP3-201ENST00000295324 SPARCP09486 303 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 ITIH1P19827 911 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 PTNP21246 168 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 C15orf40Q8WUR7 153 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM19Q96HH6 336 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 RDH12Q96NR8 316 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 CST11Q9H112 138 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 KCNK12Q9HB15 430 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 CCDC59Q9P031 241 aaKnown RBP16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 TOR1BO14657 336 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF28P17035 718 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 GMPRP36959 345 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 PRDX1Q06830 199 aaKnown RBP16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 SLC3A1Q07837 685 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 SWT1Q5T5J6 900 aaKnown RBP16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM17Q86X19 198 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 CLECL1Q8IZS7 167 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 GPR137CQ8N3F9 429 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 PNPLA1Q8N8W4 532 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 TCTN2Q96GX1 697 aa16.82■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM14AQ9Y6G1 99 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms