RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ST3GAL4Q11206 333 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 ATP6AP1Q15904 470 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 LYSMD4Q5XG99 296 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 OR52E2Q8NGJ4 325 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 STOX2Q9P2F5 926 aaPredicted RBP16.47■□□□□ 0.23
SHANK1-201ENST00000293441 HOXD8P13378 290 aaPredicted RBP16.47■□□□□ 0.23
SHANK1-201ENST00000293441 ZXDBP98169 803 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 KANK2Q63ZY3 851 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 ZER1Q7Z7L7 766 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 SCD5Q86SK9 330 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 FAM46AQ96IP4 442 aaKnown RBP16.47■□□□□ 0.23
SHANK1-201ENST00000293441 SPO11Q9Y5K1 396 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 AK1P00568 194 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 OR52A4PA6NMU1 304 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 PRAMEF2O60811 474 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 ATF6P18850 670 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 LHCGRP22888 699 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 FOLR3P41439 243 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 TUBA1BP68363 451 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 TUBA4AP68366 448 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 LRRC69Q6ZNQ3 347 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 TUBA1AQ71U36 451 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 LHFPL3Q86UP9 236 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 SLC37A3Q8NCC5 494 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 TSPEARQ8WU66 669 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 SECISBP2Q96T21 854 aaKnown RBP16.47■□□□□ 0.23
SHANK1-201ENST00000293441 STRA6Q9BX79 667 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 OR10A4Q9H209 315 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 GDE1Q9NZC3 331 aa16.47■□□□□ 0.23
SHANK1-201ENST00000293441 RHCEP18577 417 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 S100A1P23297 94 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 CERS1P27544 350 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 HTR1EP28566 365 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 MAP2K4P45985 399 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 HK3P52790 923 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 TUBA3CQ13748 450 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 EEF1A1P5Q5VTE0 462 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SEC14L1Q92503 715 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 TCEAL4Q96EI5 215 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 ACTR10Q9NZ32 417 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SCP2D1Q9UJQ7 156 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SOX30O94993 753 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 ACVR1BP36896 505 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 FASLGP48023 281 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 RIDAP52758 137 aaKnown RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 GRHL2Q6ISB3 625 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 ZNF773Q6PK81 442 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SHISA6Q6ZSJ9 500 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 POGLUT1Q8NBL1 392 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 ACVR1CQ8NER5 493 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SPRYD4Q8WW59 207 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 FGF13Q92913 245 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 TRIM43Q96BQ3 446 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 ECHDC3Q96DC8 303 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SERINC2Q96SA4 455 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SLC30A2Q9BRI3 323 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 KCMF1Q9P0J7 381 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 DTX3Q8N9I9 347 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 FUBP1Q96AE4 644 aaKnown RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 APIPQ96GX9 242 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SOX17Q9H6I2 414 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 CWH43Q9H720 699 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 KLHL21Q9UJP4 597 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 RPH3AQ9Y2J0 694 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 GGT3PA6NGU5 568 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 HTRA2O43464 458 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SNAP29O95721 258 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 CD68P34810 354 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 MAGEA2P43356 314 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 ACY1Q03154 408 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 OGFRL1Q5TC84 451 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 FAM43BQ6ZT52 329 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 PRR22Q8IZ63 422 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 CIDECQ96AQ7 238 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-201ENST00000293441 CRB3Q9BUF7 120 aa16.46■□□□□ 0.23
SHANK1-201ENST00000293441 SMAD6O43541 496 aaKnown RBP16.46■□□□□ 0.22
SHANK1-201ENST00000293441 HRGP04196 525 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 UQCRC1P31930 480 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 EIF2S3P41091 472 aaKnown RBP16.46■□□□□ 0.22
SHANK1-201ENST00000293441 MAGEA12P43365 314 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 ALG10BQ5I7T1 473 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 PM20D1Q6GTS8 502 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 DUS1LQ6P1R4 473 aaKnown RBP16.46■□□□□ 0.22
SHANK1-201ENST00000293441 LEG1Q6P5S2 330 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 COMMD6Q7Z4G1 85 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 CEACAM19Q7Z692 300 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 TMPRSS11EQ9UL52 423 aa16.46■□□□□ 0.22
SHANK1-201ENST00000293441 TRAV6A0A075B6T7 132 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 LILRB3O75022 631 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 KDELR2P33947 212 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 SLC22A16Q86VW1 577 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 PELI2Q9HAT8 420 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 SGK494L7N484 410 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 CLDN8P56748 225 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 HSD11B2P80365 405 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 GRK1Q15835 563 aa16.45■□□□□ 0.22
SHANK1-201ENST00000293441 ZNF517Q6ZMY9 492 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms