RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 EXOSC7Q15024 291 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 COLEC12Q5KU26 742 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 STON2Q8WXE9 905 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 TBC1D20Q96BZ9 403 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 NODALQ96S42 347 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 ELF4Q99607 663 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 PIP5K1AQ99755 562 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 SPNS1Q9H2V7 528 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 KAT8Q9H7Z6 458 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 METTL7AQ9H8H3 244 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 ACSS1Q9NUB1 689 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 SRPK3Q9UPE1 567 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 C17orf105B2RV13 164 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 CHRNB1P11230 501 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 RORAP35398 523 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 HSD11B2P80365 405 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 PLCXD2Q0VAA5 305 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 TRAM2Q15035 370 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 CDRT4Q8N9R6 151 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 WDR36Q8NI36 951 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 CNDP2Q96KP4 475 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 LRRC42Q9Y546 428 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 PNMA8CA0A1B0GUJ8 204 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 HBQ1P09105 142 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 CPMP14384 443 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 TLR1Q15399 786 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 JAZF1Q86VZ6 243 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 LRRC61Q9BV99 259 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 TRPV5Q9NQA5 729 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 PPT2Q9UMR5 302 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 ERVK-19Q9WJR5 959 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 HCRTR2O43614 444 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 MPZL2O60487 215 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 ST6GAL1P15907 406 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 EXOC3L2Q2M3D2 409 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 ADGRG5Q8IZF4 528 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 GHDCQ8N2G8 530 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 MS4A6EQ96DS6 147 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 CRB3Q9BUF7 120 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 EPB41L1Q9H4G0 881 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 NT5DC2Q9H857 520 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 KLHL1Q9NR64 748 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 DCAF13Q9NV06 445 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 ZNF624Q9P2J8 865 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 MED31Q9Y3C7 131 aa13.66□□□□□ -0.22
PDLIM2-201ENST00000265810 A0A0G2JPF8 293 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 HNRNPCL3B7ZW38 293 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 CH25HO95992 272 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 HNRNPCL4P0DMR1 293 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 RPS6KA3P51812 740 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 BNIP3Q12983 259 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 FAM71E1Q6IPT2 247 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 PPP1R3BQ86XI6 285 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 ZNF548Q8NEK5 533 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 MSLNLQ96KJ4 702 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 CPPED1Q9BRF8 314 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 SCO2O43819 266 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 PCGF2P35227 344 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 SELENOWP63302 87 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 TNFRSF17Q02223 184 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 KCNAB2Q13303 367 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 CCINQ13939 588 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 ZNF750Q32MQ0 723 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 TIMM50Q3ZCQ8 353 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 CEP76Q8TAP6 659 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 MPP4Q96JB8 637 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 MAGIXQ9H6Y5 334 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 MTHFD2LQ9H903 347 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 KCMF1Q9P0J7 381 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 SMIM31A0A1B0GVY4 71 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 PRAMEF2O60811 474 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 AK1P00568 194 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 FESP07332 822 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 IFI30P13284 250 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 GSTM3P21266 225 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 FZD2Q14332 565 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 CADM4Q8NFZ8 388 aa13.65□□□□□ -0.22
PDLIM2-201ENST00000265810 A0A1W2PPC1 479 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 LDOC1O95751 146 aaPredicted RBP13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 LINC00271P0C7V0 271 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 EMP2P54851 167 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 LINC00471Q8N535 108 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 HORMAD2Q8N7B1 307 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 ABHD11Q8NFV4 315 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 OR51Q1Q8NH59 317 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 ASIC5Q9NY37 505 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 EBF1Q9UH73 591 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 SH2B3Q9UQQ2 575 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 PGRMC2O15173 223 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 RHCEP18577 417 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 TLDC1Q6P9B6 456 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 COMMD2Q86X83 199 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 MMP21Q8N119 569 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 CMKLR1Q99788 373 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 CXorf36Q9H7Y0 433 aa13.64□□□□□ -0.23
PDLIM2-201ENST00000265810 ARMC1Q9NVT9 282 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms