RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 C8orf89P0DMQ9 161 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 AMD1P17707 334 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 PSMA3P25788 255 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 ACVR2AP27037 513 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 SEMA3BQ13214 749 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 ASAH1Q13510 395 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 FAM76BQ5HYJ3 339 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 SAXO2Q658L1 398 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 C6orf120Q7Z4R8 191 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 SLC38A6Q8IZM9 456 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 TEX26Q8N6G2 289 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 OR8K3Q8NH51 312 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 ST8SIA2Q92186 375 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 NARFLQ9H6Q4 476 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 ADAP2Q9NPF8 381 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 MRPL17Q9NRX2 175 aaKnown RBP14.36□□□□□ -0.11
CASC3-201ENST00000264645 I6L893 689 aaPredicted RBP14.36□□□□□ -0.11
CASC3-201ENST00000264645 RTCAO00442 366 aaKnown RBP14.36□□□□□ -0.11
CASC3-201ENST00000264645 UQCRC2P22695 453 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 CFL1P23528 166 aaKnown RBP14.36□□□□□ -0.11
CASC3-201ENST00000264645 OC90Q02509 493 aaPredicted RBP14.36□□□□□ -0.11
CASC3-201ENST00000264645 USF2Q15853 346 aaPredicted RBP14.36□□□□□ -0.11
CASC3-201ENST00000264645 NUDT13Q86X67 352 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 POMGNT2Q8NAT1 580 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 ZNF680Q8NEM1 530 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 CASTOR1Q8WTX7 329 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 MCHR1Q99705 422 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 RIOK2Q9BVS4 552 aaKnown RBP14.36□□□□□ -0.11
CASC3-201ENST00000264645 ZNF416Q9BWM5 594 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 GLS2Q9UI32 602 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 OR10H1Q9Y4A9 318 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 SNX11Q9Y5W9 270 aa14.36□□□□□ -0.11
CASC3-201ENST00000264645 ZBTB42B2RXF5 422 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 H3BUI4 141 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 CACNG3O60359 315 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 POP4O95707 220 aaKnown RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 RLN2P04090 185 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 ACRV1P26436 265 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 GABRR2P28476 465 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 HNF1BP35680 557 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 RBM34P42696 430 aaKnown RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 GPR4P46093 362 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 ETV1P50549 477 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 TPMTP51580 245 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 ZNF157P51786 506 aaPredicted RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 OPCMLQ14982 345 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 PRSS55Q6UWB4 352 aaPredicted RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 GALNTL5Q7Z4T8 443 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 DEFB128Q7Z7B8 93 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 SCD5Q86SK9 330 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 BPHLQ86WA6 291 aaPredicted RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 OOSP2Q86WS3 158 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 FOXRED2Q8IWF2 684 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.35□□□□□ -0.11
CASC3-201ENST00000264645 CLDN22Q8N7P3 220 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 STOML3Q8TAV4 291 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 CARS2Q9HA77 564 aaKnown RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 EVA1BQ9NVM1 165 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 CNIH4Q9P003 139 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 ASB4Q9Y574 426 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 PCDHGB7Q9Y5F8 929 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 PCDHGB1Q9Y5G3 927 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 CSO75390 466 aaKnown RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 ZNF821O75541 412 aaPredicted RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 RBBP9O75884 186 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 HTR1AP08908 422 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 KIAA1024LP59773 190 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 GALK2Q01415 458 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 MC1RQ01726 317 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 TPRG1Q6ZUI0 275 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 PHYKPLQ8IUZ5 450 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 ZBTB44Q8NCP5 570 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 OR2T33Q8NG76 320 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 CIDECQ96AQ7 238 aaPredicted RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 NTMT1Q9BV86 223 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 TMEM39AQ9NV64 488 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 TMEFF2Q9UIK5 374 aaPredicted RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 CSNK1G3Q9Y6M4 447 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 RGS13O14921 159 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 ZNF3P17036 446 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 CBLP22681 906 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 ARFIP1P53367 373 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 WDR5P61964 334 aaKnown RBP14.35□□□□□ -0.11
CASC3-201ENST00000264645 FAM171BQ6P995 826 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 KANSL1Q7Z3B3 1105 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 OR2M2Q96R28 347 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 OR2A14Q96R47 310 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 KXD1Q9BQD3 176 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 OR2S2Q9NQN1 319 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 IL17CQ9P0M4 197 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 C5AR2Q9P296 337 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 PRKAG2Q9UGJ0 569 aa14.35□□□□□ -0.11
CASC3-201ENST00000264645 E7EQ34 232 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 NEDD8-MDP1E9PL57 170 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PRODHO43272 600 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 PAK4O96013 591 aaPredicted RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 M6PRP20645 277 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 VIPR1P32241 457 aa14.34□□□□□ -0.11
CASC3-201ENST00000264645 ZNF140P52738 457 aaPredicted RBP14.34□□□□□ -0.11
CASC3-201ENST00000264645 XKR4Q5GH76 650 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms