RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ATP1B1P05026 303 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 LAMP1P11279 417 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 SOX18P35713 384 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 NCBP2P52298 156 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■□□□ 13
SDF4-201ENST00000263741 UFM1P61960 85 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 LINC00696Q6ZRV3 163 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 RIMKLAQ8IXN7 391 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 M1APQ8TC57 530 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 ELP5Q8TE02 316 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 VMP1Q96GC9 406 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 SENP5Q96HI0 755 aaPredicted RBP17.06■□□□□ 0.32
SDF4-201ENST00000263741 NPAS2Q99743 824 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 ZNF552Q9H707 407 aaPredicted RBP17.06■□□□□ 0.32
SDF4-201ENST00000263741 RNPEPL1Q9HAU8 725 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 MAT2BQ9NZL9 334 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 TP53TG5Q9Y2B4 290 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 WBP11Q9Y2W2 641 aaKnown RBP17.06■□□□□ 0.32
SDF4-201ENST00000263741 EML6Q6ZMW3 1958 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 EXPH5Q8NEV8 1989 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 PDPK1O15530 556 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 CLDN8P56748 225 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 HSPB3Q12988 150 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 EXOSC7Q15024 291 aaKnown RBP17.06■□□□□ 0.32
SDF4-201ENST00000263741 PRICKLE4Q2TBC4 344 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 IRAK1BP1Q5VVH5 260 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 ZNF551Q7Z340 670 aaPredicted RBP17.06■□□□□ 0.32
SDF4-201ENST00000263741 SPATA19Q7Z5L4 167 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 UTP4Q969X6 686 aaKnown RBP17.06■□□□□ 0.32
SDF4-201ENST00000263741 FBXL20Q96IG2 436 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 PELOQ9BRX2 385 aaKnown RBP17.06■□□□□ 0.32
SDF4-201ENST00000263741 DPY30Q9C005 99 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 GLIPR2Q9H4G4 154 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 GPR45Q9Y5Y3 372 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 SPTA1P02549 2419 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 FAM208BQ5VWN6 2430 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 MYO1GB0I1T2 1018 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 MKRN2OSH3BPM6 223 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 ERVH48-1M5A8F1 160 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 KALRNO60229 2985 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 CLPSP04118 112 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 PCSK2P16519 638 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 PRPS1L1P21108 318 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 NTSP30990 170 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 ARFIP2P53365 341 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 MGAT2Q10469 447 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 PGS1Q32NB8 556 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 MORN4Q8NDC4 146 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 OR9I1Q8NGQ6 314 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 OR1N1Q8NGS0 311 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 TAS2R7Q9NYW3 318 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 ATP6V1HQ9UI12 483 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 PPIEQ9UNP9 301 aaKnown RBP17.05■□□□□ 0.32
SDF4-201ENST00000263741 SMG1Q96Q15 3661 aaKnown RBP17.05■□□□□ 0.32
SDF4-201ENST00000263741 UBDO15205 165 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 IGKV3-11P04433 115 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 ICAM2P13598 275 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 DUSP8Q13202 625 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 CEBPEQ15744 281 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 TRMT12Q53H54 448 aaKnown RBP17.05■□□□□ 0.32
SDF4-201ENST00000263741 COLEC12Q5KU26 742 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 MTDHQ86UE4 582 aaKnown RBP17.05■□□□□ 0.32
SDF4-201ENST00000263741 VWA5B2Q8N398 1253 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 AMDHD1Q96NU7 426 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 TMEM120AQ9BXJ8 343 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 SEMA4CQ9C0C4 833 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 COPS7AQ9UBW8 275 aa17.05■□□□□ 0.32
SDF4-201ENST00000263741 SPENQ96T58 3664 aaKnown RBP17.04■□□□□ 0.32
SDF4-201ENST00000263741 SYNDIG1LA6NDD5 238 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 CCDC22O60826 627 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 CBX6O95503 412 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 CALB2P22676 271 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 IL12AP29459 219 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 CLCN2P51788 898 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 SOX8P57073 446 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 ZNF628Q5EBL2 1059 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 CPTPQ5TA50 214 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 C6orf163Q5TEZ5 329 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 TMEM107Q6UX40 140 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 R3HCC1LQ7Z5L2 792 aaKnown RBP17.04■□□□□ 0.32
SDF4-201ENST00000263741 C9orf40Q8IXQ3 194 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 FAM9CQ8IZT9 166 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 FAM13CQ8NE31 585 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 SLC7A6OSQ96CW6 309 aaPredicted RBP17.04■□□□□ 0.32
SDF4-201ENST00000263741 MAGED4Q96JG8 741 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 DEFB126Q9BYW3 111 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 CSAG2Q9Y5P2 127 aa17.04■□□□□ 0.32
SDF4-201ENST00000263741 DYRK3O43781 588 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 MC3RP41968 323 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 CD97P48960 835 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 CDK9P50750 372 aaKnown RBP17.03■□□□□ 0.32
SDF4-201ENST00000263741 BIKQ13323 160 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 SPANXN4Q5MJ08 99 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 AGAP7PQ5VUJ5 663 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 OR4F3Q6IEY1 312 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 OR7G2Q8NG99 324 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 C9orf43Q8TAL5 461 aaPredicted RBP17.03■□□□□ 0.32
SDF4-201ENST00000263741 MTERF3Q96E29 417 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 RILPQ96NA2 401 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 AGAP4Q96P64 663 aa17.03■□□□□ 0.32
SDF4-201ENST00000263741 BBC3Q96PG8 261 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms