RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 KLHL29Q96CT2 875 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 L3HYPDHQ96EM0 354 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 SGCZQ96LD1 299 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 PELOQ9BRX2 385 aaKnown RBP13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 BRINP2Q9C0B6 783 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 OR10A5Q9H207 317 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 ANKZF1Q9H8Y5 726 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 L2HGDHQ9H9P8 463 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 BRF2Q9HAW0 419 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 PROK2Q9HC23 129 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 TNFRSF12AQ9NP84 129 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 MID1IP1Q9NPA3 183 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 CACNA1CQ13936 2221 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 CSMD2Q7Z408 3487 aa13.4□□□□□ -0.26
RBFOX2-201ENST00000262829 CREBBPQ92793 2442 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 TLDC2A0PJX2 215 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 KRT6AP02538 564 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 PROCP04070 461 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 KRT6BP04259 564 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 MYL2P10916 166 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 S1PR1P21453 382 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 KRT6CP48668 564 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 NAGLUP54802 743 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 MRPS35P82673 323 aaKnown RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 MGAT2Q10469 447 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 LCP2Q13094 533 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 DUSP8Q13202 625 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 MTFR2Q6P444 385 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ZYG11AQ6WRX3 759 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 GK5Q6ZS86 529 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SLC22A16Q86VW1 577 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SLC22A9Q8IVM8 553 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SRRM1Q8IYB3 904 aaKnown RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 GOLM1Q8NBJ4 401 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 MYRIPQ8NFW9 859 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 CDC26Q8NHZ8 85 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 CHTF18Q8WVB6 975 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ZBTB9Q96C00 473 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 DMRTA2Q96SC8 542 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SH2D2AQ9NP31 389 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 PNPLA3Q9NST1 481 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 FETUBQ9UGM5 382 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 BCAP29Q9UHQ4 241 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ENTPD4Q9Y227 616 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 DLGAP4Q9Y2H0 992 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 MYO9AB2RTY4 2548 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 GNG14A0A1W2PPG7 69 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ACOT7O00154 380 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 GSTA1P08263 222 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 IL3P08700 152 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 FBXO45P0C2W1 286 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SOX18P35713 384 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 FUT7Q11130 342 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ART3Q13508 389 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 TRMT12Q53H54 448 aaKnown RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 C10orf62Q5T681 223 aaPredicted RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 HLA-DQA1Q5Y7H0 255 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ARHGAP11AQ6P4F7 1023 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 RPTNQ6XPR3 784 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ZNF441Q8N8Z8 693 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 CCDC63Q8NA47 563 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 EXOSC8Q96B26 276 aaKnown RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 SDCCAG3Q96C92 435 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 CNRIP1Q96F85 164 aaPredicted RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 REPIN1Q9BWE0 567 aaKnown RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 ZDHHC11Q9H8X9 412 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 IL1RL2Q9HB29 575 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 EHD3Q9NZN3 535 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 PTGDR2Q9Y5Y4 395 aa13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 V9GYY5 206 aaPredicted RBP13.39□□□□□ -0.27
RBFOX2-201ENST00000262829 FREM3P0C091 2139 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 C1orf226A1L170 272 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 OR6C76A6NM76 312 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 E9PLN8 166 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 PCDH7O60245 1069 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 PLIN3O60664 434 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 GLRA3O75311 464 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 PCSK2P16519 638 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 KRT4P19013 534 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 GALNSP34059 522 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 TRPC1P48995 793 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 SMSP52788 366 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 PRSS53Q2L4Q9 553 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 PRICKLE4Q2TBC4 344 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 SPDYAQ5MJ70 313 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 ZNF585AQ6P3V2 769 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 XKRXQ6PP77 449 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 BNC2Q6ZN30 1099 aaPredicted RBP13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 LCA5Q86VQ0 697 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 CCDC116Q8IYX3 515 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 PAQR8Q8TEZ7 354 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 DIO2Q92813 273 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 KAT2AQ92830 837 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 ADIPOR1Q96A54 375 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms