RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CTSEP14091 401 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 PPM1FP49593 454 aaPredicted RBP12.81□□□□□ -0.36
VMP1-201ENST00000262291 SIM1P81133 766 aaPredicted RBP12.81□□□□□ -0.36
VMP1-201ENST00000262291 ADPRMQ3LIE5 342 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 TMEM35AQ53FP2 167 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 REEP3Q6NUK4 255 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 FIGLAQ6QHK4 219 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 SLC5A8Q8N695 610 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 TSTD1Q8NFU3 115 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 FEVQ99581 238 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 FAIM2Q9BWQ8 316 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 PITHD1Q9GZP4 211 aaPredicted RBP12.81□□□□□ -0.36
VMP1-201ENST00000262291 LYVE1Q9Y5Y7 322 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 AHRP35869 848 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 SRSF5Q13243 272 aaKnown RBP12.81□□□□□ -0.36
VMP1-201ENST00000262291 SMAD4Q13485 552 aaKnown RBP12.81□□□□□ -0.36
VMP1-201ENST00000262291 C6orf141Q5SZD1 244 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 KDM4DQ6B0I6 523 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 ASPGQ86U10 573 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 COMTD1Q86VU5 262 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 NLGN4XQ8N0W4 816 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 TBC1D19Q8N5T2 526 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 TTC29Q8NA56 475 aaPredicted RBP12.81□□□□□ -0.36
VMP1-201ENST00000262291 SUN3Q8TAQ9 357 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 SLC35G5Q96KT7 338 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 COL21A1Q96P44 957 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 CCDC90BQ9GZT6 254 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 TP63Q9H3D4 680 aaPredicted RBP12.81□□□□□ -0.36
VMP1-201ENST00000262291 CTPS2Q9NRF8 586 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 HRASLS2Q9NWW9 162 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 ADAM29Q9UKF5 820 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 TNFRSF10CO14798 259 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 SRFP11831 508 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 NTSP30990 170 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 MC3RP41968 323 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 PCBP3P57721 371 aaKnown RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 ISL1P61371 349 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 TDGQ13569 410 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 PUM1Q14671 1186 aaKnown RBP eCLIP12.8□□□□□ -0.36
VMP1-201ENST00000262291 ZNF691Q5VV52 312 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 ABI3BPQ7Z7G0 1075 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 GPR32P1Q8NGA4 272 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 ZNF300Q96RE9 604 aaPredicted RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 NIPSNAP1Q9BPW8 284 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 MIR1-1HGQ9H1L0 117 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 MARCH7Q9H992 704 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 PAK1IP1Q9NWT1 392 aaPredicted RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 WSB2Q9NYS7 404 aaPredicted RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 GMPPBQ9Y5P6 360 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 TPST2O60704 377 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 NDUFS1P28331 727 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 RABIFP47224 123 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 MAZP56270 477 aaKnown RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 RBBP4Q09028 425 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 SPCS2Q15005 226 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 MRM1Q6IN84 353 aaKnown RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 LACC1Q8IV20 430 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 OR5T3Q8NGG3 340 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 UTP15Q8TED0 518 aaKnown RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 RSC1A1Q92681 617 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 GTPBP3Q969Y2 492 aaKnown RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 EFHD2Q96C19 240 aaPredicted RBP12.8□□□□□ -0.36
VMP1-201ENST00000262291 NEUROD4Q9HD90 331 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 PCOLCE2Q9UKZ9 415 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 PADI2Q9Y2J8 665 aa12.8□□□□□ -0.36
VMP1-201ENST00000262291 PROM1O43490 865 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 HMGN2P05204 90 aaKnown RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 NR2F1P10589 423 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 CRHBPP24387 322 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 FRKP42685 505 aaPredicted RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 RNF144AP50876 292 aaPredicted RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 LIM2P55344 173 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 STXBP1P61764 594 aaKnown RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 YPEL5P62699 121 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 DEF8Q6ZN54 512 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 Q7L0L9 218 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 CCDC71Q8IV32 467 aaPredicted RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 LGI4Q8N135 537 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 OR4D11Q8NGI4 311 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 ADAMTS16Q8TE57 1224 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 SH3YL1Q96HL8 342 aaPredicted RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 OR2A5Q96R48 311 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 PRR14Q9BWN1 585 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 RAD21L1Q9H4I0 556 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 ANKMY1Q9P2S6 941 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 WARS2Q9UGM6 360 aaKnown RBP12.79□□□□□ -0.36
VMP1-201ENST00000262291 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 HS3ST3A1Q9Y663 406 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 SPTY2D1-AS1A0A0U1RR47 76 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 CLDN25C9JDP6 229 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 TNFRSF10AO00220 468 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 HTR1AP08908 422 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 DRD2P14416 443 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 IL9P15248 144 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 CD6P30203 668 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 HLCSP50747 726 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 CDK5R2Q13319 367 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 RUNX2Q13950 521 aa12.79□□□□□ -0.36
VMP1-201ENST00000262291 CRB2Q5IJ48 1285 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms