RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PEX12O00623 359 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 HOXD4P09016 255 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ALDOCP09972 364 aaKnown RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 PIM1P11309 404 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 CTSSP25774 331 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 GABRA2P47869 451 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 GIPRP48546 466 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 NUDT6P53370 316 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 NKX3-2P78367 333 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 HYAL4Q2M3T9 481 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 AARDQ4LEZ3 155 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 VWA1Q6PCB0 445 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 C11orf42Q8N5U0 333 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 OR13C3Q8NGS6 347 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 OR56A3Q8NH54 315 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 TMBIM1Q969X1 311 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 NEDD4LQ96PU5 975 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 UTP23Q9BRU9 249 aaKnown RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 UBTD1Q9HAC8 227 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF320A2RRD8 509 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF207O43670 478 aaKnown RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 KLK3P07288 261 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 CALCBP10092 127 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 PIGFQ07326 219 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 MFSD13AQ14CX5 517 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 STXBP5Q5T5C0 1151 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 PLA2G4FQ68DD2 849 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 C4orf19Q8IY42 314 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF567Q8N184 647 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 C7orf43Q8WVR3 580 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 METTL21AQ8WXB1 218 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 PHF21BQ96EK2 531 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF514Q96K75 400 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 POP1Q99575 1024 aaKnown RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 CDC6Q99741 560 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 LHX5Q9H2C1 402 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ACKR4Q9NPB9 350 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 TLR9Q9NR96 1032 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 VNN3Q9NY84 501 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ACOT9Q9Y305 439 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 PLCH1Q4KWH8 1693 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 RNF225M0QZC1 329 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 NPHS1O60500 1241 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 MT-ND4LP03901 98 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ACSM1Q08AH1 577 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 CD276Q5ZPR3 534 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 DCLRE1AQ6PJP8 1040 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 OVCH2Q7RTZ1 564 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 NLGN4XQ8N0W4 816 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 STPG2Q8N412 459 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 RNF149Q8NC42 400 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 NLGN4YQ8NFZ3 816 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 OR9I1Q8NGQ6 314 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 SPPL2AQ8TCT8 520 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF675Q8TD23 568 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 CSGALNACT1Q8TDX6 532 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 P2RX7Q99572 595 aaKnown RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 WDR55Q9H6Y2 383 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 KLHL8Q9P2G9 620 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 WDR45Q9Y484 360 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 PLEKHM1Q9Y4G2 1056 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A0D9SG52 128 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 SC5DO75845 299 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 OR10J4P0C629 311 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 TLX1P31314 330 aaPredicted RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 TNFSF8P32971 234 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 HUNKP57058 714 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 LIPEQ05469 1076 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 MGAT3Q09327 533 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 SNRNP35Q16560 246 aaKnown RBP6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF789Q5FWF6 425 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 ADNP2Q6IQ32 1131 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC46A3Q7Z3Q1 461 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 RNF130Q86XS8 419 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 OR52N2Q8NGI0 321 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 CMBLQ96DG6 245 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC35A5Q9BS91 424 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 CHRDQ9H2X0 955 aa6.46□□□□□ -1.38
PDGFRA-201ENST00000257290 NCANO14594 1321 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM170BA6NMN3 283 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ENSAO43768 121 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CRYBA1P05813 215 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 C1GALT1C1LP0DN25 315 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CD1BP29016 333 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PTGIRP43119 386 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 HNRNPA3P51991 378 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 MLF1P58340 268 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 BTG1P62324 171 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF484Q5JVG2 852 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC22A10Q63ZE4 541 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM270Q6UE05 265 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 THNSL2Q86YJ6 484 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FUNDC1Q8IVP5 155 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 MS4A15Q8N5U1 240 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 MTMR14Q8NCE2 650 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 SPPL3Q8TCT6 385 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 PDCD2LQ9BRP1 358 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ACTRT3Q9BYD9 372 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TM6SF2Q9BZW4 377 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 ATG5Q9H1Y0 275 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms