RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 KRBA1A5PL33 1030 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 OR5K3A6NET4 321 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF701M0R085 212 aaPredicted RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 B3GALT2O43825 422 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 EIF2S1P05198 315 aaKnown RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 ALOX12P18054 663 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 PPP2R1BP30154 601 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 MAN2A2P49641 1150 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 ANXA11P50995 505 aaKnown RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 CXCR4P61073 352 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 ROR2Q01974 943 aaKnown RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 COL9A2Q14055 689 aaPredicted RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 UBXN2BQ14CS0 331 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 ABHD13Q7L211 337 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 RBM45Q8IUH3 476 aaKnown RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 OR13F1Q8NGS4 319 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 BBS10Q8TAM1 723 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 PHF10Q8WUB8 498 aaKnown RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 KAT2AQ92830 837 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 RERGQ96A58 199 aaPredicted RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 ALPK1Q96QP1 1244 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 LIN28AQ9H9Z2 209 aaKnown RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 C3orf14Q9HBI5 128 aa17.39■□□□□ 0.37
HOXC11-201ENST00000243082 TDRD6O60522 2096 aaKnown RBP17.39■□□□□ 0.37
HOXC11-201ENST00000243082 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 ZSCAN9O15535 394 aaPredicted RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 PCDHGA12O60330 932 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 TRMUO75648 421 aaKnown RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 CCNB2O95067 398 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 CBLP22681 906 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 DCKP27707 260 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 XKP51811 444 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 PRSS41Q7RTY9 318 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 KRT73Q86Y46 540 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 LACC1Q8IV20 430 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 GIMAP5Q96F15 307 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 CNDP2Q96KP4 475 aaKnown RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 OR7D2Q96RA2 312 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 CHRDQ9H2X0 955 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 NMNAT1Q9HAN9 279 aaPredicted RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 SLC22A7Q9Y694 548 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 GON4LQ3T8J9 2241 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 B4DGG1 531 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 SEC14L2O76054 403 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 TYRP1P17643 537 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 NUP107P57740 925 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 OLR1P78380 273 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 SIM1P81133 766 aaPredicted RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 SMN1Q16637 294 aaKnown RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 COLEC12Q5KU26 742 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 GPR107Q5VW38 600 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 GTF2IRD2BQ6EKJ0 949 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF770Q6IQ21 691 aaPredicted RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 GTF2IRD2Q86UP8 949 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 OOSP2Q86WS3 158 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 RBM12BQ8IXT5 1001 aaKnown RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 TMEFF1Q8IYR6 380 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 ENTHD1Q8IYW4 607 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 SHISA5Q8N114 240 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 LRRC25Q8N386 305 aaPredicted RBP17.38■□□□□ 0.37
HOXC11-201ENST00000243082 OR4K14Q8NGD5 310 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 NODALQ96S42 347 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 DUSP21Q9H596 190 aa17.38■□□□□ 0.37
HOXC11-201ENST00000243082 TRIOBPQ9H2D6 2365 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 TRBV4-1A0A0J9YWV2 114 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 A0A1W2PR77 199 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 ARRDC5A6NEK1 342 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF860A6NHJ4 632 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 METTL12A8MUP2 240 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 HCRTR1O43613 425 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 WBP4O75554 376 aaKnown RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 EPPINO95925 133 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF10P21506 573 aaPredicted RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 PCMT1P22061 227 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 CD27P26842 260 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 GGT2P36268 569 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 SH3BGRP55822 239 aaPredicted RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 PROX2Q3B8N5 592 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 MANEAQ5SRI9 462 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 ERI1Q8IV48 349 aaKnown RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 OR4N5Q8IXE1 308 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 OR7G2Q8NG99 324 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 VANGL1Q8TAA9 524 aaPredicted RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 ZNF420Q8TAQ5 688 aaPredicted RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 APH1BQ8WW43 257 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 C12orf43Q96C57 262 aaKnown RBP17.37■□□□□ 0.37
HOXC11-201ENST00000243082 DHRS1Q96LJ7 313 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 DOK1Q99704 481 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 FOXQ1Q9C009 403 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 LHPPQ9H008 270 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 LYRM4Q9HD34 91 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 EQTNQ9NQ60 294 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 PRDM9Q9NQV7 894 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 RASSF1Q9NS23 344 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 MS4A12Q9NXJ0 267 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 NTMQ9P121 344 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 ACAD8Q9UKU7 415 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 NINQ8N4C6 2090 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 A0A0G2JPF8 293 aa17.37■□□□□ 0.37
HOXC11-201ENST00000243082 FAM170BA6NMN3 283 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms